Gene Information

Name : ssuB (AvCA6_30480)
Accession : YP_007899047.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Resistance
Product : aliphatic sulfonates transport ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3157932 - 3158732 bp
Length : 801 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCGCCCTGCACAATCTGAAGAACGGCATTCCGCTGGGGATCGAAGGCATCCACAAGTCTTTCGGCGAACGGCAGGT
GCTGAAGGCGATCGATCTGCATATTCCGGCCGGGCAGTTCGTCGCCGTGGTCGGTCGCAGCGGCTGCGGCAAGAGCACGC
TGCTGCGCCTGCTGGCGGGGCTGGATGCGCCCAGCGGCGGCGCGCTGCTGGCCGGCCAGGTACCCCTGGCGCAGGCGCGC
GAGGATACCCGGCTGATGTTCCAGGATGCGCGCCTGCTGCCCTGGAAGCGGGTGATCGACAATGTCGGTCTCGGTCTGTC
CGGCGACTGGCGTCCCCGTGCCGAGGAGGCTCTGGCCGAGGTAGGACTGGCCGAGCGCGCCGGGGAGTGGCCGGCGGCGC
TCTCCGGCGGCCAGAAGCAGCGCGTGGCGCTGGCCCGGGCATTGATCCACCGTCCGCGCCTGCTGCTGCTCGACGAGCCA
CTGGGGGCGCTGGATGCGCTGACCCGCATCGAAATGCAGCAACTGATCGAACGGCTCTGGCAGCAGCATGGCTTCACCGT
GCTGCTGGTCACCCACGACGTCAGCGAGGCGGTCGCCGTCGCCGACCGGGTGATCCTGATCGAGGAGGGGCGCATCGGCC
TGGATCTGCCGGTCGACCTGCCGCGCCTGCGCAGCCGTGGGTCTGCTCGTCTCGCCGCGCTGGAGGCGGAAGTCCTCGAG
CGGGTGCTCGCGCCGGCGGCCGCCCCGCCGAACGAGAGCGAGCCCCGCTCGGAGCGTAGCGCGGGAGGCGCTGCGTCCTG
A

Protein sequence : 
MSALHNLKNGIPLGIEGIHKSFGERQVLKAIDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLDAPSGGALLAGQVPLAQAR
EDTRLMFQDARLLPWKRVIDNVGLGLSGDWRPRAEEALAEVGLAERAGEWPAALSGGQKQRVALARALIHRPRLLLLDEP
LGALDALTRIEMQQLIERLWQQHGFTVLLVTHDVSEAVAVADRVILIEEGRIGLDLPVDLPRLRSRGSARLAALEAEVLE
RVLAPAAAPPNESEPRSERSAGGAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-30 52
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-14 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-16 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-16 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-16 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB YP_007899047.1 aliphatic sulfonates transport ATP-binding subunit NC_012469.1.7686878. Protein 4e-15 41