Gene Information

Name : AvCA6_29510 (AvCA6_29510)
Accession : YP_007898952.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3040917 - 3041669 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence : 
ATGAATACCATCACTTCGATAGGCATGGCCCCGCTCGTCGAGCTGCGCCGGGCCACCAAGCACTACCAGATCGGCGAAAA
GCCGGTGATCGCCCTCAAGGGCATCGACATCAGCATCCAGGAGCGCGAGTTCGTCGCTATCTGGGGACCCTCGGGGTCCG
GCAAGTCGACCCTGTGCAACCTCATCGGCATGCTCGACTCGCCCACCTCGGGCAGCGTGCTGATCGACGGCCGGGAGGTC
GACGACCTGTCGGACAACGCCCGCAGCGAGCTGCGCAACCGGACCATCGGCTTCGTCTTCCAGAACTTCAACCTGATACC
GGTGCTCTCGGCGCTGGAGAACGTCATGCTGCCGCTGCAGATCGCCGGCGCTTCCTCCGTCGTCGCCCGGGAGCGGGCGC
TGGAGCGGCTGACCGAGGTGGGCCTCGAGAAGCACGTCGCCCACCGTCCGGCCAAGCTTTCCGGCGGCCAGCAGCAGCGG
GTCGCCATCGCCCGGGCGCTGGTCACCGACCCGGCCCTGGTGATCGCCGACGAACCCACCGCCAACCTCGACTCCGGCAA
CGCCCGACGGATCATCGAGCTGATGCTCGACATCAACGCCAGCCACGGCACCGCCTTCGTCTTCTCGACCCATGACCAGC
GCCTGCTGGAGAGCGTCAAGCGCCGGGTCCTGATGCAGGACGGCGAGATCGGCAGCGACAGCCAGCCGGCGCGTCCGGGA
GCGCAGACCCGCATCGCAGGGAGCCGCCCATGA

Protein sequence : 
MNTITSIGMAPLVELRRATKHYQIGEKPVIALKGIDISIQEREFVAIWGPSGSGKSTLCNLIGMLDSPTSGSVLIDGREV
DDLSDNARSELRNRTIGFVFQNFNLIPVLSALENVMLPLQIAGASSVVARERALERLTEVGLEKHVAHRPAKLSGGQQQR
VAIARALVTDPALVIADEPTANLDSGNARRIIELMLDINASHGTAFVFSTHDQRLLESVKRRVLMQDGEIGSDSQPARPG
AQTRIAGSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AvCA6_29510 YP_007898952.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 3e-44 47
AvCA6_29510 YP_007898952.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-35 45
AvCA6_29510 YP_007898952.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 2e-38 45