Gene Information

Name : fliP (AvCA6_24130)
Accession : YP_007898434.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2409384 - 2410142 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence : 
ATGAATCCGACCGTCCTGCGCCCCGGCCTGTGGCCGGCCGCCGCCCTGGGCCTCATCCTGTGCCTGCCAGCGTCCGCCCT
GGCCGCCCTGCCCGCCCTCACCAGCAAGCCGCTGGCCGGCGGCGGCCAGCAATGGTCGCTGAGCCTGCAGACCCTGCTGC
TGCTCAGCTCGATGGCCTTCCTGCCGGCCCTGCTGCTGATGATGACCGCCTTCACCCGGATCATCATCGTTCTCGGCCTG
CTGCGCACCGCCATCGGCACCCCGGCCGCACCGCCCAACCAGGTCCTGCTGGGCCTGGCGCTGTTCCTCACCCTGTTCAT
CATGTCGCCGGTACTCGACCGCACCTACCAGAGCGCCTGGCTGCCCTTCTCCCGCGACGAGATCGGCTTCGAGCAGTTCC
TCGAAACCGGTAGCCAGCCGTTCCGCGAGTTCATGCTGGCGCAGACCCGCGAGAGCGACCTGGCGCTGTTCGCCCGCCTG
GCCAGGCTGGGCGAACTCGAAGGCCCCGAGCAGGTACCGCTGCGCGTGCTGATGCCGGCCTTCGTCACCAGCGAGCTGAA
GACCGCCTTCCAGATCGGCTTCACCATCTTCATCCCCTTCCTGATCATCGATCTGGTGGTGGCCAGCGTGCTGATGGCGC
TGGGCATGATGATGGTTCCGCCGGCGACCATTTCCCTGCCCTTCAAGCTGATGCTTTTCGTGCTGGTCGATGGCTGGCAG
TTGCTGATCGGCTCGCTGGCGCAAAGCTTTTACATATAG

Protein sequence : 
MNPTVLRPGLWPAAALGLILCLPASALAALPALTSKPLAGGGQQWSLSLQTLLLLSSMAFLPALLLMMTAFTRIIIVLGL
LRTAIGTPAAPPNQVLLGLALFLTLFIMSPVLDRTYQSAWLPFSRDEIGFEQFLETGSQPFREFMLAQTRESDLALFARL
ARLGELEGPEQVPLRVLMPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQ
LLIGSLAQSFYI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 5e-21 45
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 8e-28 43
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 1e-27 43
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 1e-27 43
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 8e-28 43
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 6e-28 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 6e-28 43
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 3e-21 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 3e-21 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 3e-21 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 5e-27 42
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 4e-27 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 4e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_007898434.1 flagellar biosynthetic protein VFG2338 Protein 9e-62 83
fliP YP_007898434.1 flagellar biosynthetic protein VFG2494 Protein 1e-56 73
fliP YP_007898434.1 flagellar biosynthetic protein VFG2016 Protein 8e-44 58
fliP YP_007898434.1 flagellar biosynthetic protein VFG0044 Protein 1e-25 44
fliP YP_007898434.1 flagellar biosynthetic protein VFG0188 Protein 2e-28 42
fliP YP_007898434.1 flagellar biosynthetic protein VFG0394 Protein 5e-26 41