Gene Information

Name : AvCA_32220 (AvCA_32220)
Accession : YP_007894168.1
Strain : Azotobacter vinelandii CA
Genome accession: NC_021149
Putative virulence/resistance : Unknown
Product : Succinate-semildehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3315966 - 3317420 bp
Length : 1455 bp
Strand : -
Note : -

DNA sequence :
ATGCAACTGACCGATAGCACTCTGCTGCGCACCAGGGCCTTCATCGCTGGCCAATGGGTCGATGCCGACGACGGCGCCAC
CTTCGTAGTGACCGATCCGGCCGATCTGTCGCCGATCGGCACGGTCGCTTCCCTCGGCGCTGCCGAAACCGCCCGTGCCA
TCGCCGCCGCCGAGGCCGCCTTGCCGGCCTGGCGCGCGAAGACCGCCAAGGAGCGTTCGGTACTGCTACGCAAGTGGTTC
GAACTGATAATGGCCAACCGGGAAGATCTCGCCCGCCTGCTCAGTCGGGAGCAGGGCAAGCCGCTGGCCGAGAGCCGCGG
CGAGATCGCCTACGGCGCCAGCTTCATCGAATGGTTCGCCGAGGAAGCCAAGCGCACCTATGGCGACGTGATTCCACACG
ATAAGCAAGGCCGCCGTCTGGTGGTCATCAGGCAGCCGATCGGCGTGGTCGCCGCCATCACCCCGTGGAACTTTCCCAAC
GCGATGATCACCCGCAAGGCCGGCCCGGCGCTCGCCGCCGGATGCACCATCGTCATCAAACCAGCCTCGGAAACCCCGCT
GTCGGCCCTCGCCCTGGCCGAGCTGGCGGTGCGCGCCGGCATCCCGGCCGGCGTGATCAATGTGGTGACCGGCGACCCCC
GAGTGATCGGTGGCGAACTGACGCGCAACCCGGCGGTGCGCAAGCTGTCCTTCACCGGTTCCACCGGTATCGGCAAGCTG
CTAATGGCGCAATGCGCCGACACCATGAAGAAAGTCAGCATGGAACTGGGCGGCAACGCGCCCTTCATCGTCTTCGACGA
CGCCGACCTGGATGCCGCCGTGGCCGGCGCCCTGGCCTCCAAGTACCGCAACAGCGGCCAGACCTGCGTGTGCACCAACC
GCCTGCTGGTACAGGAGGGCGTGTACGACGCGTTTGCCCGTCGCCTGGTCGCTGCGGTCAAGGCGCTCAAGGTTGGCCCG
GCGTGTGAGGAGGGCGCCCAATTGGGCCCGCTGATCAACGCCAAGGCGGTGCTCAAGGTGCAGGAACACATCGAGGACGC
CCTGACCAAGGGCGCCAGGCTACTCGCTGGCGGCAAGCCGCACTCTTTGGGCGGCAGCTTCTTCGAACCGACCGTTCTCG
GCGAGGCGACCCCGGAGATGCTGGTGGCGCGCGAGGAAACCTTCGGCCCGTTGGCGCCGATCTTCCGCTTCCGGAGCGAG
GCCGAGGCTATCCAGATGGCCAACGACACCGAATTCGGCCTGGCCTCCTACCTGTACACCCGCGACCTGAGCCGCGCCTG
GCGCGTGAGCGAGGCGCTGGAATACGGCATGGTCGGTGTCAACGAGGGCGTCATTTCCACCGAGATCGCTCCGTTCGGCG
GCATCAAGGAGTCGGGTACTGGCCGCGAAGGTTCGAAATTCGGCATCGATGATTATGTCGAGCTGAAATACCTGTGCTTT
GGTATCGATGCCTGA

Protein sequence :
MQLTDSTLLRTRAFIAGQWVDADDGATFVVTDPADLSPIGTVASLGAAETARAIAAAEAALPAWRAKTAKERSVLLRKWF
ELIMANREDLARLLSREQGKPLAESRGEIAYGASFIEWFAEEAKRTYGDVIPHDKQGRRLVVIRQPIGVVAAITPWNFPN
AMITRKAGPALAAGCTIVIKPASETPLSALALAELAVRAGIPAGVINVVTGDPRVIGGELTRNPAVRKLSFTGSTGIGKL
LMAQCADTMKKVSMELGGNAPFIVFDDADLDAAVAGALASKYRNSGQTCVCTNRLLVQEGVYDAFARRLVAAVKALKVGP
ACEEGAQLGPLINAKAVLKVQEHIEDALTKGARLLAGGKPHSLGGSFFEPTVLGEATPEMLVAREETFGPLAPIFRFRSE
AEAIQMANDTEFGLASYLYTRDLSRAWRVSEALEYGMVGVNEGVISTEIAPFGGIKESGTGREGSKFGIDDYVELKYLCF
GIDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-152 72