Gene Information

Name : AvCA_31560 (AvCA_31560)
Accession : YP_007894104.1
Strain : Azotobacter vinelandii CA
Genome accession: NC_021149
Putative virulence/resistance : Unknown
Product : Transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3263904 - 3264929 bp
Length : 1026 bp
Strand : -
Note : -

DNA sequence :
ATGTTGACCCAGGAGCAAGCAGTGGAGATCAGAGTATTAGCCCGTCAAGGGCACAGCATTCGGCAGATCGCCAAGATGCT
GGGCGTGTCCCGCAACACCGTCCGGCGCTACCTCAAGGAGCCCACCGTCCCGCGCTACTCGCCGCGAGACCCCAGGCCCA
CCAAGCTCGACCCCTTCCATGACTATCTGCGCGAGCGGGTGAAGCAGGCGCATCCGCTCTGGCTGCCGGCCACCGTGCTG
CTGCGCGAGATCCGCGAGCAAGGCTACCAGGGCGGCGCTTCCCAGTTGCGCGCCTGGCTGGCCAGACTCAAGCCGAGCAG
GCCGGACGATGGCCCGGCGGTGCGCTTCGAGACCGAGCCCGGCCAGCAGATGCAGGCTGACTTCGTGGTTTTCCGCCGCG
CCAAATCACCGTTGTCGGCCTTCGTCGCCACCCTGGGCTACAGCCGGATGACTTACGTCCATTTCGTGCCGGACGAGTCG
TTCGACTCGGTGCATGACGCGTTGCTGCTGGCCTTCGACTACTTCGGCGGTGTCCCGCAGCACGTGCTGTTCGACAACAT
GAAGACCGTCGTGCTGGAACGCGATGCCTATGGCGACGGCAGCCACCGCTTCCACCCCGGGCTGCTTCAACTGGCTGACG
ATCTGGGCTTCCACATCCGCCTGTGCCGCCCCTACCGGGCGCGTACCAAGGGCAAGGTCGAGCGCTTTAACCGCTACCTG
CGCGAGAGCTTCTACAACCCGTTGCACAGCCGGGTGAAGGCCGCCGGTCTGCTGGTGGATTGCGGCACAGCCAATCGGCT
GGTCGGCGACTGGCTGGCCGAGGTCGCCAACGTGCGCGTGCATGCCACGCTCGGTGAACGCCCGATCGATCGCTGGCGTC
ACGAGCAAGGCCAACTGACACCCCTGCCGCAGGCTCTGCGGCGGGCCTGGGGGCCGTTGCTGGGGGAGCGGCCAGGGCCC
GTACCGCATGAGTCGTTGCAGCACCCGCTGTCGGTCTACGAGTCGATCCGGGAGGCCTGCGCATGA

Protein sequence :
MLTQEQAVEIRVLARQGHSIRQIAKMLGVSRNTVRRYLKEPTVPRYSPRDPRPTKLDPFHDYLRERVKQAHPLWLPATVL
LREIREQGYQGGASQLRAWLARLKPSRPDDGPAVRFETEPGQQMQADFVVFRRAKSPLSAFVATLGYSRMTYVHFVPDES
FDSVHDALLLAFDYFGGVPQHVLFDNMKTVVLERDAYGDGSHRFHPGLLQLADDLGFHIRLCRPYRARTKGKVERFNRYL
RESFYNPLHSRVKAAGLLVDCGTANRLVGDWLAEVANVRVHATLGERPIDRWRHEQGQLTPLPQALRRAWGPLLGERPGP
VPHESLQHPLSVYESIREACA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 3e-77 50
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 3e-77 50
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-77 50
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 5e-78 50
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 5e-78 50
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 4e-78 50
y2411 NP_669718.1 transposase Not tested HPI Protein 5e-78 50
api83 CAF28557.1 transposase Not tested YAPI Protein 4e-78 50
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 5e-78 50
unnamed CAA21403.1 - Not tested HPI Protein 5e-78 50
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 3e-77 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AvCA_31560 YP_007894104.1 Transposase VFG1514 Protein 1e-77 50
AvCA_31560 YP_007894104.1 Transposase VFG1461 Protein 3e-78 50
AvCA_31560 YP_007894104.1 Transposase VFG1626 Protein 1e-77 50
AvCA_31560 YP_007894104.1 Transposase VFG1607 Protein 1e-77 50