|
Name : AvCA_27190 (AvCA_27190) Accession : YP_007893678.1 Strain : Azotobacter vinelandii CA Genome accession: NC_021149 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 2789430 - 2791382 bp Length : 1953 bp Strand : - Note : decatenates replicating daughter chromosomes DNA sequence : ATGGCGACCATGCGGCTCTTCCTCTGTGAAAAACCTTCCCAGGCCAAGGACATCGCCAAGGTGCTCCAGGCCACCCGGCG CGGCGACGGCTGCTGGCTCGGCCCGGACCTAGCTGTGACCTGGTGCATCGGCCATCTGCTGGAAACTGCGCCGCCGGATG CCTACGACGCCCGCTACAAGCGTTGGGATCTGAGCGACCTGCCGATCGTCCCCGAGCACTGGAAGATGCTGGTCAAGCCC AAGACCGCCAGCCAGTACAAGGTAATCAAGCGCCTGCTCGGCGAGTGCCGCGAACTGATCATCGCCACCGACGCCGACCG CGAAGGCGAGATGATCGCCCGCGAACTGGTGGAGCATTGCCGTTATCGCGGCCCGATCCGCCGGCTGTGGCTGTCGGCGC TGGACGATGCCTCGATCCGCAAGGCGCTGGCGGCGCTCAAGCCGGGTACCGAGACTTTCAGCCTTTACCATTCCGCGCTG GGCCGTTCCCGCGCCGACTGGCTGATCGGCATGAACATGAGCCGGCTGTTCACCCTGCTCGGACGCCAATCCGGCTATCA GGGGGTGCTGTCGGTGGGGCGGGTGCAGACGCCGACCCTGCGCCTGGTGGTGGACCGCGACCGCAGCATCGCCGACTTCG TGCCGGTGCCCTGGTGGGCCATCGAGGTGCAACTGCTGGCCGAGGGCACACCTTTCACCGCCCAGTGGCGTGCGCCGGAG GATGCCTGCGACGACCAGGGGCGCTGCCTCAAACAGGAGCTGGCGCAGCAGGCGGCGCAGGACATGCGCCACGCCGGCAG CGCGCGGCTGGTCGCGCTCAAGACCGAGCGGATACGCGAGATGCCGCCGCTGCCGTTCGACCTGGGCACGCTACAGGAAA TCTGCTCGAAGAAGCTCGGCCTCGGCGCCCAGGAGACCCTGGACATCGCCCAGGCGCTCTACGAGACGCACAAGGTCATC ACCTACCCGCGCAGCGACTGCGGCTACCTGCCGCAGAGCCAGCACGGCGAGGCTCCGGCGATCCTTGCCGCGCTGGAGCG GACCGATCCGGCGCTGGCCGGGCTGATGCACCACATCGACCCGCGACGCCGCTCGCGGGCCTGGAACGATGCCAGGGTCG GCGCCCACCACGGCATCATCCCCACCGCCGCCGCGCAGAGCCTCGACCGTCTGGTCGGCAAGCAGTGCGCCGTCTACACC CTGATCCGGGCGCGCTACCTGGCGCAGTTCCTGCCCAACCACGAGTACGATCGTACCCAGGCCGACTTCGACTGCGCCGG CCATGCCCTGCGCGCGGTGGGCAAGCGCATCGTTGAGCCCGGCTGGCGGCGCGCATTGCCCGAAGCCCTGACCCCGGCCA AGGGCCGCGAAACACCGCCGTCGCAGGAACTGCCGGCCTTGCGCGAAGGGCAGGACTGTGCGGTGGCCGAGGTGACGCTC AAGGACCTCTGGACCCAGCCGCCCAAACCCTACACCGAGGGCGACCTGATCAAGGCGATGAAGAACGTCGCCAAACTGGT GGACGATCCGCGCCTCAAGCAGAAGCTCAAGGACACCACCGGCATCGGCACCGAGGCGACCCGCGCCGGGATCATCCAGG CTCTCATCGAGCGCGGTTATCTGCTCAAGCAGGGCAAGGCGCTGGCCGCCACGCCGGCCGCCTTCAGCCTGATCGACGCC GTGCCGCGGCCCATCGCCGACCCCGGTACCACAGCGATCTGGGAGCAGGCGCTGGACATGGTGCAGAGCGGCGAGATGAG TCTGGAGGCGTTCGTCGCCAAGCAGTCGGCCTGGATGAGCAAGCTCATCGAACGCTGCGCCGGCCTGCGTCTGACCATCA GTGGTCCGGCGGCTCCGGTCGGACGAGGCGCCGGGCCCTGGAAGAAGAAGCGCAAGGCGGGCAAGCCCGGAGCCGGCGGC AGGCGTCGCGCCAGGCCGGCCGCGCCGCCCTGA Protein sequence : MATMRLFLCEKPSQAKDIAKVLQATRRGDGCWLGPDLAVTWCIGHLLETAPPDAYDARYKRWDLSDLPIVPEHWKMLVKP KTASQYKVIKRLLGECRELIIATDADREGEMIARELVEHCRYRGPIRRLWLSALDDASIRKALAALKPGTETFSLYHSAL GRSRADWLIGMNMSRLFTLLGRQSGYQGVLSVGRVQTPTLRLVVDRDRSIADFVPVPWWAIEVQLLAEGTPFTAQWRAPE DACDDQGRCLKQELAQQAAQDMRHAGSARLVALKTERIREMPPLPFDLGTLQEICSKKLGLGAQETLDIAQALYETHKVI TYPRSDCGYLPQSQHGEAPAILAALERTDPALAGLMHHIDPRRRSRAWNDARVGAHHGIIPTAAAQSLDRLVGKQCAVYT LIRARYLAQFLPNHEYDRTQADFDCAGHALRAVGKRIVEPGWRRALPEALTPAKGRETPPSQELPALREGQDCAVAEVTL KDLWTQPPKPYTEGDLIKAMKNVAKLVDDPRLKQKLKDTTGIGTEATRAGIIQALIERGYLLKQGKALAATPAAFSLIDA VPRPIADPGTTAIWEQALDMVQSGEMSLEAFVAKQSAWMSKLIERCAGLRLTISGPAAPVGRGAGPWKKKRKAGKPGAGG RRRARPAAPP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 65 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 64 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 62 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 3e-152 | 51 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 9e-149 | 50 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-148 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-148 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 3e-150 | 50 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 7e-117 | 42 |
