Gene Information

Name : kpsF (AvCA_12840)
Accession : YP_007892295.1
Strain : Azotobacter vinelandii CA
Genome accession: NC_021149
Putative virulence/resistance : Virulence
Product : Arabinose 5-phosphate isomerase protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1249515 - 1250549 bp
Length : 1035 bp
Strand : -
Note : -

DNA sequence :
GTGAGCAAATATGACCTTTACCGCTATAATCGACGCCTTTTTCAAGCGACGAGCCGCCCTATGCCACACTCGAGCAACCC
GATCCAGTCAGCCCAACGCACCATACGCCTGGAAATCGAGGCCATCGAGGCGCTTCTTGCACGCATCGACGATACGTTCA
CCACGGCCTGCAAACTGATTCTCGAGTGCAAGGGGCGGATAGTGGTCGTCGGCATGGGCAAATCCGGGCACATCGGGCGC
AAGATTGCCGCCACCCTGGCGAGTACCGGAACACCGGCATTCTTCGTCCATCCCGGCGAAGCCAGCCACGGAGACATGGG
CATGATCACACGCGACGATCTGGTCCTGGCCCTTTCCAACTCCGGCTCCACCGTGGAGATCCTTACCCTGCTGCCACTGA
TTCAACGCCTTGGCATCACCCTGATCAGCATGACCGGCAATCCAGACTCTCCCCTGGCAGGAGCGGCTACCGTCAATCTC
GACGCCGGCGTCAGCCAGGAAGCCTGTCCGCTCAATCTGGCGCCCACCTCATCCACCACGACCGCCTTGGTGCTCGGCGA
CGCACTGGCCATCGCCCTGCTCGAGGCGCGAGGCTTCACCGCCGAGGACTTCGCCTTCTCCCACCCCGGCGGCGCTCTCG
GCCGTCGCCTGCTGCTGAAGGTGGAAAACATCATGCACGCCGGCGATAGCCTGCCCTGCGTGCAGCGCGGCACCACGCTG
CGCGAAGCGCTGCTGGAAATGACCCACAAGGGGCTTGGCATGACCGTGGTGCTCGAGACCGATGGACGTTTGGCCGGCAT
CTTCACGGACGGCGACCTGCGTCGCGCCCTGGATCGCAATATCGATGTGCGCCAGGCCACCATCGACGAAGTGATGACCC
CGCACGGCAAGACCGCACGCGCAGGAATGCTCGCCGCCCAGGCCCTGAAAATCATGGAAGACCACAAGATCAACGCCCTG
GTGGTGGTAGACGAGGAGGATCGTCCGGTCGGCGCCTTGAATATGCACGATCTGCTGCAGGCGGGGGTTCTGTAA

Protein sequence :
MSKYDLYRYNRRLFQATSRPMPHSSNPIQSAQRTIRLEIEAIEALLARIDDTFTTACKLILECKGRIVVVGMGKSGHIGR
KIAATLASTGTPAFFVHPGEASHGDMGMITRDDLVLALSNSGSTVEILTLLPLIQRLGITLISMTGNPDSPLAGAATVNL
DAGVSQEACPLNLAPTSSTTTALVLGDALAIALLEARGFTAEDFAFSHPGGALGRRLLLKVENIMHAGDSLPCVQRGTTL
REALLEMTHKGLGMTVVLETDGRLAGIFTDGDLRRALDRNIDVRQATIDEVMTPHGKTARAGMLAAQALKIMEDHKINAL
VVVDEEDRPVGALNMHDLLQAGVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 1e-54 45
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 7e-55 45
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 2e-54 45