|
Name : phyA (MHH_c05350) Accession : YP_007882364.1 Strain : Mannheimia haemolytica M42548 Genome accession: NC_021082 Putative virulence/resistance : Virulence Product : capsule polysaccharide modification protein PhyA Function : - COG functional category : - COG ID : - EC number : - Position : 493079 - 495169 bp Length : 2091 bp Strand : - Note : - DNA sequence : ATGCTTAGCTATTTAGTGTTTTTTAGTAAAATTATAAAAATCCCTAATTTAAAAGGTTTTTTACCTCATTGTGAAATTAG GCGAAGACCTCTTGTGGGAAAAACCTTTATTGCTCAAAAAAGACCGAACCAAATCATCGGCTGGGGGCTTCGTCCTTCAG CGGTGGGATCAAGAGCTTATGCACAAAAACATCAACTTCCCTATATTGCATTAGAAGACGGCTTTTTACGCTCACTAGGG CTGGGTGTAAAAGGCTATCCGCCATTTTCTTTAGTTTATGATGATATAGGTATTTATTACGATACCACCTGTCCTTCTCG TTTAGAAAAGTTATTGCTTGAAAAACCTTTACAGGATCAAGAGCAAATCAAGCTTGCAGAGAGAGCATTATCTCAAATCT TAACTTACGGACTTTCTAAATATAATCACGCACTAGATTTTAGTGAAATCCCCTCTGCCAAAGAAAAAATCGTGTTAGTT ATTGACCAAACCTTTGGTGATATGGCGGTGAAATATGGTCAAGCGAGTGAAGTGGATTTCAATAAAATGTTGGAAACGGC AATCAGTGAGAATCCAGAGGCTCAAATTTGGGTAAAAACTCACCCCGATGTATTAAGTGGCAAGAAGAAAGGCTATTTGA CCGATTTACCTCAATATACTGATAGGGTCAGAATTATTACTGAAGATGTGAATCCGGCAAGTTTGATTAAATTGTGTGAG AAAGTCTATTGCGTAACTTCGCAAATGGGGTTTGAGGCATTATTATTAGGTAAAAAAGTGGTTACCTTTGGTGTACCGTG GTTTGCCGGTTGGGGGGTAACAGATGATCGTAACGAAGCGGTTCAACTATTAGTTCAACAAAATAGACGGAAAGATCGTT CATTACTGCAACTTTTTTATGCTGCGTATTTTGATTACAGCCGTTATATTAATCCGAATACCGGTGAGAAAGGCTCTATT TTTGATGTCATCGATTATCTATATAAAGCCAAAAGATTAAATCAGCGCTTAAGTGGGAATCTATACTGTATTGGTATGTC GCTATGGAAACAGGCGGTAATTAAGCCGTTTTTTAATTTGCCACAATGTCGATTACATTTTGTTCGTTCGCTAAATTCTT TAAAAAAACGACCGCTTGCAGATAATGCAAAAATTTTAGTTTGGAGCAATGGCAAAGCGGATGTCTTGCAATTTGCACAG CAGAATAATATTCCATTGTTAAGAATGGAAGATGGATTCATTCGCTCTGTCGGACTAGGCGCTAATTTAGTTGCACCGCT TTCTTTAGTAGTCGATGATTTAGGCATTTATTTTAATGCAGAGAACACTTCACGATTAGAACAAATTTTATTGAGTGCAG AGCATTTTTCTGAAACTGATTTGTCTTATGCTGAAACATTAAGGCAGAAATTGGTGGCTAGCCATATTGGAAAATATAAT GTGGGCGGTGGCGATGTAAAATTTAATGCTCAAGGTAAAAAAATAATTCTTGTACCGGGGCAGGTAGAAGATGACGCTTC GATCAAATCAGGTTCTCCACAAATTAAAAGAAATCTGGATTTACTGAAAAAAGTGAGGGAATTAAACCCTAGTGCCTATA TTATTTATAAGCCTCACCCTGATGTGGTAAGTGGTAATCGAGTCGGTCAGATTCCTACGGCAGAAACACGCAGGTTTGCG GATCAGATGGTGGATAATGCCAATATTTTAGATTGTATTTTAATTGCAGATGAAGTGCATACAATGACATCTTTAGCCGG TTTCGAAGCATTATTAAGAGGTAAAAAAGTGCATTGCTACGGATTACCTTTTTATGCTGGTTGGGGATTGACGGAAGATA GATTGAAGTCGGCACGCAGAGGTAAATCTTTGACATTATCTCAGTTAATTGCCGCAACATTGATATATTACCCTCTGTAT GTTGATCCTATAAGCAGGCAGTTTATTGATGCCAATCAAGCGATTCATATATTGTCACAACAGAAACGAAACCTAACCAA TCAAAGGATTAAACGTTCTTGGGTGAGTAAACAATATGGAAAATTACAGCATCTTTATCGTGCGTTTAAATATGCTTCCC ACACTAAATAA Protein sequence : MLSYLVFFSKIIKIPNLKGFLPHCEIRRRPLVGKTFIAQKRPNQIIGWGLRPSAVGSRAYAQKHQLPYIALEDGFLRSLG LGVKGYPPFSLVYDDIGIYYDTTCPSRLEKLLLEKPLQDQEQIKLAERALSQILTYGLSKYNHALDFSEIPSAKEKIVLV IDQTFGDMAVKYGQASEVDFNKMLETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQYTDRVRIITEDVNPASLIKLCE KVYCVTSQMGFEALLLGKKVVTFGVPWFAGWGVTDDRNEAVQLLVQQNRRKDRSLLQLFYAAYFDYSRYINPNTGEKGSI FDVIDYLYKAKRLNQRLSGNLYCIGMSLWKQAVIKPFFNLPQCRLHFVRSLNSLKKRPLADNAKILVWSNGKADVLQFAQ QNNIPLLRMEDGFIRSVGLGANLVAPLSLVVDDLGIYFNAENTSRLEQILLSAEHFSETDLSYAETLRQKLVASHIGKYN VGGGDVKFNAQGKKIILVPGQVEDDASIKSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDVVSGNRVGQIPTAETRRFA DQMVDNANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGLPFYAGWGLTEDRLKSARRGKSLTLSQLIAATLIYYPLY VDPISRQFIDANQAIHILSQQKRNLTNQRIKRSWVSKQYGKLQHLYRAFKYASHTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 0.0 | 59 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 1e-137 | 49 |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 2e-137 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| phyA | YP_007882364.1 | capsule polysaccharide modification protein PhyA | VFG0692 | Protein | 0.0 | 60 |
| phyA | YP_007882364.1 | capsule polysaccharide modification protein PhyA | VFG0704 | Protein | 0.0 | 60 |
| phyA | YP_007882364.1 | capsule polysaccharide modification protein PhyA | VFG0259 | Protein | 0.0 | 59 |
