Gene Information

Name : lolD (MHH_c28510)
Accession : YP_007884633.1
Strain : Mannheimia haemolytica M42548
Genome accession: NC_021082
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing ABC transport system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 2696661 - 2697368 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAATAAGAACGGAAATAAAATGACAGAATTACTTCGCTGTGAACATATCAGCAAATTTTACGATGAGGGCGAACA
GAAAGTTCAGGTGCTAAAAGAGGTGTCATTTTCGATGAACGAAGGTGAGCTGGTAGCGATTGTCGGTAGTTCAGGTTCCG
GCAAAAGCACCCTATTGCACACATTAGGCGGGCTAGATCAGCCAAGCACCGGTGAAGTCTGGATTCGAGGGCAATCTCTG
CAACAGCTCAGTTCAGACAAATTAGCGTTATTGCGTAACCAAAACTTAGGCTTTGTGTACCAATTTCATCACTTAATGGC
AGACTTTACCGCCCTTGAAAATGTGATGATGCCGATGCTGATCGGCAAACAGAACAAAACTGAAGCTGCCAATCGTGCCG
AGAAAATGCTACAAGCGGTCGGATTAGCTCATCGAATGACACATCGCCCATCAGCACTTTCAGGCGGCGAACGCCAACGG
GTGGCGATTGCCCGAGCGTTGGTTAATAATCCGGCTCTGGTACTTGCCGATGAACCGACCGGTAATTTAGACCAAAAAAC
CACTGAAAGCATTTTTGAGCTGATTCAACAGCTCAACCAAGAGCAGAACATTGCGTTTTTATTAGTAACGCATGATTTAA
ATCTAGCGAATAAACTTTCACGTAGTCTTGTAATGCGAGATGGCGTGTTAAGCGAGGGGAGCTTATGA

Protein sequence : 
MNNKNGNKMTELLRCEHISKFYDEGEQKVQVLKEVSFSMNEGELVAIVGSSGSGKSTLLHTLGGLDQPSTGEVWIRGQSL
QQLSSDKLALLRNQNLGFVYQFHHLMADFTALENVMMPMLIGKQNKTEAANRAEKMLQAVGLAHRMTHRPSALSGGERQR
VAIARALVNNPALVLADEPTGNLDQKTTESIFELIQQLNQEQNIAFLLVTHDLNLANKLSRSLVMRDGVLSEGSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_007884633.1 lipoprotein-releasing ABC transport system ATP-binding protein LolD NC_012469.1.7686878. Protein 7e-43 47
lolD YP_007884633.1 lipoprotein-releasing ABC transport system ATP-binding protein LolD NC_008702.1.4606598. Protein 3e-37 44