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Name : clpB (MHH_c25920) Accession : YP_007884381.1 Strain : Mannheimia haemolytica M42548 Genome accession: NC_021082 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 2424961 - 2427528 bp Length : 2568 bp Strand : + Note : - DNA sequence : ATGAATTTTGAAAAAATGACCACAAAACTGCAAGAAGCCTTGGCTGAATCACAGTCGCTTGCGGTAGGAAAAGATAATCC GTACATCGAACCGGCACATTTGCTCTATGCGTTGTTAAAACAAGAAGGTGGCTCGATTGCTTCTTTGTTTACCACATTAA ATGTTGATGTACCGACTTTAATTCGTGAATTACAACAAATTTTAGACCGCTTGCCGAAAGTTCAAGGCGGTAACACCCAA GTTTCACAACAGTTGGTCAGACTGTTAAATCAATCAGACAAACTGGCACAACAATTCGGCGACAGCTTTATTTCATCAGA ACTATTTGTTCTAGCTGCACTTGATGACAATGGCGATTTGGGGAAACTATTTAAACAATTTGGCTTAAACAAGGAAAAAC TAACACAAGCCATCAGCCAAATTCGAGGAGGAGACACAGTGAATAATCAAAATGCGGAAGATACCCGCCAAGCACTCAAA AAATATACGATTGATTTAACCGAAAGAGCCAAAGCCGGTAAATTAGACCCGGTTATCGGGCGTGATGAAGAAATTCGCCG TGCGGTGCAAGTCTTACAACGCCGTACCAAAAACAACCCTGTGTTAATTGGTGAACCGGGTGTGGGGAAAACGGCGATTG TAGAAGGCTTGGCACAGCGTATTGTAAACGGCGAAGTGCCGGAAGGCTTGAAAAATAAGCGTGTACTTTCGCTGGATATG GGAGCATTAATTGCCGGTGCGAAATATCGTGGTGAATTTGAAGAGCGTTTAAAAGCGGTTTTAAACGACCTGGCGAAAGA AGAAGGGCAAGTTATCCTCTTTATTGATGAAATTCACACGATGGTTGGAGCAGGCAAAACAGACGGAGCAATGGACGCCG GCAACTTATTAAAACCAAGCCTTGCCCGTGGTGAATTGCACTGTGTGGGGGCTACAACCCTTGATGAATATCGCCAATAC ATTGAAAAAGACGCAGCCCTTGAACGCCGTTTCCAAAAAGTATTGGTGGACGAACCAACGGTTGAAGATACGATTGCGAT TTTACGTGGTTTGAAAGAGCGTTATGAAATCCATCATCACGTTCAAATTACAGACCCTGCCATCGTGGCGGCGGCAACGC TTTCGCACCGTTATGTGTCTGACCGTCAATTGCCGGATAAAGCGATTGACTTGATTGATGAAGCCGCTTCAAGCCTGCGT ATGGAGATTGATTCTAAACCTGAGCCGTTGGATAAATTAGAACGCCGCATTATCCAACTCAAATTGGAACGCCAAGCGTT ACAAAAAGAGGAAGATGAAGCGAGCCGTCAGCGTTTAGCCAAATTAGACGAAGAAATGGCAGCGAAAGAGCGTGAATATT CCGAGCTGGAAGAAATCTGGAAAGCGGAAAAATCCGCCTTACTTGGTACACAGCATATTAAATCGGAGTTGGAAAATGCC CGAATTGCGATGGATCAGGCTCGCCGTGAAAACGATTTCGAGAAGATGTCGGAATTGCAATATGGCGTGATTCCAAACTT GGAAAAACAGTTACAAGCGGTCGAAAATGGCGAAAAAAATGCAGATGCTCAGCTCCTCCGTACTAAAGTCACCGAAGAGG AAATTGCGGAAGTGCTTTCAAAAGCAACGGGCATTCCTGTTGCAAAAATGATGGAAGGCGAGAAGGAAAAACTCCTTCGT ATGGAAGAAGTATTACACGCTCGGGTTATCGGGCAAAATGAAGCCGTTGATGCGGTGGCAAATGCGATTCGCCGTAGCCG TGCCGGACTTTCCGATCCGAATAAACCGATTGGTTCATTCCTATTCTTAGGACCGACCGGCGTGGGTAAAACCGAGTTAA GCAAAACCTTAGCTAATTTCTTGTTTGACGATCCTGATGCTATGGTGCGAATTGATATGTCTGAATTTATGGAAAAACAC AGCGTATCCCGCTTAGTGGGCGCACCTCCGGGCTATGTCGGCTACGAAGAAGGCGGCTATTTGACCGAAGCGGTTCGCCG CCATCCATATTCGGTAGTGTTACTTGATGAAGTGGAAAAAGCTCACCCTGATGTGTTTAACATTTTATTGCAAGTGTTAG ATGACGGGCGTTTAACCGACGGGCAAGGCAGAACAGTCGATTTCCGCAATACGGTAGTGATTATGACCTCAAACTTAGGC TCGCATTTAATTCGAGAAAATGCGTATAAAGGCTATGATGTGGTTAAAGAAATGGTGATGGAAGTCGTCGGACAGCACTT CCGCCCTGAATTTATCAACCGTATTGATGAAACGGTGATGTTCCACTCACTTGGTCAAGAGCATATCCGTTCGATTGCGA AGATTCAGCTACAACGCTTAATCCAACGCTTGGCAGAACGAGGCTATGAGGTGACAGTAACCGATGCAGCATTAGATCAT ATCGGCAAGGCTGGTTTCGATCCGCTGTTCGGAGCAAGACCACTGAAACGTGCGATTCAACAAGAGCTTGAAAATCCGCT TGCTCAACAGATCTTAAGCGGTAAATTATTACCGAATAAAGCCGTTACGGTGGATTACCAAAACGGGCAGATTGTTGCAA CACAATAA Protein sequence : MNFEKMTTKLQEALAESQSLAVGKDNPYIEPAHLLYALLKQEGGSIASLFTTLNVDVPTLIRELQQILDRLPKVQGGNTQ VSQQLVRLLNQSDKLAQQFGDSFISSELFVLAALDDNGDLGKLFKQFGLNKEKLTQAISQIRGGDTVNNQNAEDTRQALK KYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDM GALIAGAKYRGEFEERLKAVLNDLAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQY IEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSLR MEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEEMAAKEREYSELEEIWKAEKSALLGTQHIKSELENA RIAMDQARRENDFEKMSELQYGVIPNLEKQLQAVENGEKNADAQLLRTKVTEEEIAEVLSKATGIPVAKMMEGEKEKLLR MEEVLHARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELSKTLANFLFDDPDAMVRIDMSEFMEKH SVSRLVGAPPGYVGYEEGGYLTEAVRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG SHLIRENAYKGYDVVKEMVMEVVGQHFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYEVTVTDAALDH IGKAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPNKAVTVDYQNGQIVATQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-162 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007884381.1 | chaperone protein ClpB | VFG0079 | Protein | 9e-144 | 42 |
