|
Name : MHH_c24290 (MHH_c24290) Accession : YP_007884223.1 Strain : Mannheimia haemolytica M42548 Genome accession: NC_021082 Putative virulence/resistance : Unknown Product : type I restriction enzyme M protein Function : - COG functional category : - COG ID : - EC number : 2.1.1.72 Position : 2302982 - 2304316 bp Length : 1335 bp Strand : + Note : hindVIIP DNA sequence : GTGCCGGAGCAAGCCCGCTGGGACAACATCAAATCATTAAGCAAACTCAATCTTGGCGATGAATTGCCTTGGGGAGACAA ATTTAAAGGTGTCAGCCGCTTGATTGATGATGCCTTTGAAGCCATCGAACGGGAAAACCCCAAACTCAAAGGCGTACTCC AACGCATTGCCGGCTTTGGCGTGCCTGATGAAATGCTCACAGGCTTAATTGACCTGTTCTCACGCACCAATTTCACCCAG CCTATGCACAATGGCGAACCTGTGCATCTGCAAGCCAAAGACATTTTAGGGCACGTCTATGAATACTTTCTTGGGCAATT TGCCCTTGCCGAAGGCAAAAAAGGCGGTCAATACTTCACGCCAAAATCCATCGTTACCCTGATTGTTGAAATGCTCGAAC CCTATTCAGGGCGGATTTACGACCCAGCTATGGGCAGCGGCGGCTTTTTTGTGCAAGCTGACCGCTTTATTCAGGCTCAC GCAGGCAACCGCAACGCCATTTCCGTTTATGGGCAAGAATCCAACTCCACCACTCGCAAACTGGCGGTGATGAATATGGC GATTCGTGGTATTCCCTTTGACTTTGGCGACAAGCCCGAAGATACCCTACTAAACCCTTTGCACATCGACAAAAAAATGG ATGTTGTGATGGCAAATCCGCCCTTTAACCAAAAAGAGTGGTGGAATGAAAGCCTAGCAAACGATCCACGCTGGGCATAC GGCACACCGCCGCAAGGCAACGCCAACTTTGCGTGGTTGCAACATATGATTTACCACCTCTCCCCCAAAGGCAAAATGGC ACTCCTGCTCGCCAACGGCTCAATGAGCAGCCAAACTTCAGGCGAAGGCGACATTCGCAAAAACATCGTGCAAGCTGACC TTGTCGAAGCGATGATTGCCCTGCCCAATCAGCTATTCACCAACACCCAAATCCCTGCCTGCATTTGGATTATCAATAAA GCCAAAGCCAGAAAAGGTGAAGTGCTGTTTATCAACGCCACCCAAATAGGCTACCTGAAGGACCGCGTCTTGCGTGATTT TACCGCTGATGACATCGCCAAAATCAGCGACACCTACCACAACTGGCAAAAACAGAACGGCTACGAAAATATCCCTGCGT TTTGTTATTGTGCCACGCTGGACGAAATCGCCAAAAACGATTTTGTGCTGACCGCAGGGCGATATGTCGGTGCGGTACAA GAAGAAAATGACGGCGTGCCGTTTGCAGAAAAAATGCAGGAATTGACCGCTTTATTGAATGAACAATTTAAACAAGGGCG GGAATTGGAACAGCAAATCGCAGAGAATTTAAAGGGGTTGGGATATGGCATTTAA Protein sequence : MPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENPKLKGVLQRIAGFGVPDEMLTGLIDLFSRTNFTQ PMHNGEPVHLQAKDILGHVYEYFLGQFALAEGKKGGQYFTPKSIVTLIVEMLEPYSGRIYDPAMGSGGFFVQADRFIQAH AGNRNAISVYGQESNSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDKKMDVVMANPPFNQKEWWNESLANDPRWAY GTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGDIRKNIVQADLVEAMIALPNQLFTNTQIPACIWIINK AKARKGEVLFINATQIGYLKDRVLRDFTADDIAKISDTYHNWQKQNGYENIPAFCYCATLDEIAKNDFVLTAGRYVGAVQ EENDGVPFAEKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 4e-145 | 63 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 8e-102 | 48 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 2e-101 | 47 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 1e-99 | 46 |
