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Name : tetH (MHH_c23160) Accession : YP_007884113.1 Strain : Mannheimia haemolytica M42548 Genome accession: NC_021082 Putative virulence/resistance : Resistance Product : tetracycline efflux protein, class H Function : - COG functional category : - COG ID : - EC number : - Position : 2178983 - 2180185 bp Length : 1203 bp Strand : + Note : - DNA sequence : ATGAATAAATCAATTATTATTATACTGCTGATCACCGTATTAGATGCCATTGGTATCGGGCTTATCATGCCAGTACTCCC TACTCTATTAAATGAATTTGTCAGTGAAAATTCACTGGCAACCCATTACGGTGTGCTATTAGCGCTCTATGCTACCATGC AGGTTATTTTTGCTCCTATTCTAGGACGACTGTCTGATAAATACGGCAGAAAACCCATCTTGCTGTTTTCCCTTTTAGGC GCGGCACTCGACTATCTTTTAATGGCATTCTCAACCACACTTTGGATGCTCTATATTGGGCGCATCATTGCGGGGATCAC AGGCGCAACAGGTGCCGTATGTGCATCAGCGATGAGTGATGTGACTCCCGCTAAAAATCGAACTCGCTATTTTGGTTTCT TAGGTGGTGCTTTTGGTGTTGGCCTTATTATCGGCCCAATGCTAGGGGGATTATTAGGTGATATCAGTGCTCATATGCCA TTTATTTTTGCCGCTATTTCACACTCGATATTATTAATACTCTCTTTGCTCTTTTTCCGAGAAACACAAAAAAGAGAAGC GCTTGTTGCCAATAGGACACCTGAAAACCAAACTGCCTCAAATACAGTCACTGTTTTTTTTAAGAAAAGCCTCTACTTTT GGTTAGCAACCTATTTTATTATCCAGCTTATCGGGCAAATTCCTGCCACCATCTGGGTGCTGTTTACACAATATCGTTTT GATTGGAACACAACTTCTATCGGTATGTCTTTGGCGGTTCTGGGTGTATTACATATTTTCTTTCAGGCGATTGTCGCTGG GAAATTGGCACAAAAATGGGGCGAAAAAACCACCATTATGATCAGTATGTCTATTGATATGATGGGCTGTTTATTATTAG CGTGGATAGGCCACGTTTGGGTCATCTTACCAGCATTAATTTGCTTAGCGGCAGGAGGTATGGGGCAACCCGCATTACAA GGTTATTTATCAAAATCTGTCGATGATAATGCGCAAGGGAAATTACAAGGTACTCTGGTGAGCCTAACCAATATTACCGG GATCATTGGTCCCCTTTTATTTGCCTTTATTTATAGTTATAGCGTCGCTTATTGGGATGGTCTGTTATGGCTGATGGGGG CAATACTTTATGCTATGTTGCTTATTACCGCTTATTTTCACCAAAGAAAAACCACACCTAAAGCTGTTATTTCAACCCCT TAA Protein sequence : MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLG AALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMP FIFAAISHSILLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRF DWNTTSIGMSLAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQ GYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tet(H) | YP_005176248.1 | tetracycline efflux protein, class H | Not tested | ICEPmu1 | Protein | 2e-144 | 99 |
| tetA(B) | AAL08445.1 | tetracycline resistance protein TetA(B) | Not tested | SRL | Protein | 3e-71 | 54 |
| tetA(B) | AEZ06045.1 | tetracycline efflux protein | Not tested | Tn6167 | Protein | 4e-71 | 54 |
| tetB | AEA34667.1 | tetracycline resistance determinant | Not tested | Not named | Protein | 3e-71 | 54 |
| BJAB07104_00277 | YP_008207742.1 | Permeases of the major facilitator superfamily | Not tested | AbaR25 | Protein | 4e-71 | 54 |
| BJAB0868_00281 | YP_008211607.1 | Permeases of the major facilitator superfamily | Not tested | AbaR26 | Protein | 4e-71 | 54 |
| tetA(B) | AEQ20905.1 | tetracycline resistance protein | Not tested | Tn6166 | Protein | 4e-71 | 54 |
| tetA | YP_005797160.1 | tetracycline resistance protein, class G (TETA(G)) | Not tested | AbaR4e | Protein | 1e-69 | 54 |
| ABZJ_00260 | YP_005524216.1 | Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) | Not tested | AbaR22 | Protein | 4e-71 | 54 |
| tetA(B) | AFH57202.1 | tetracycline resistance protein | Not tested | AbaR4a | Protein | 3e-71 | 54 |
| tetA | CAJ77034.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 4e-62 | 50 |
| tet(G) | AAK02051.1 | tetracycline resistance protein | Not tested | SGI1 | Protein | 3e-58 | 50 |
| tetA(G) | ABZ01843.1 | TetA(G) | Not tested | SGI2 | Protein | 3e-58 | 50 |
| tetA(G) | AGK06974.1 | TetA(G) | Not tested | SGI1 | Protein | 3e-58 | 50 |
| tetA(G) | AGK07104.1 | TetA(G) | Not tested | SGI1 | Protein | 3e-58 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | Y15510.gene.p01 | Protein | 3e-145 | 100 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | CP004022.1.gene2534. | Protein | 3e-120 | 80 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | AF038993.gene.p01 | Protein | 2e-119 | 80 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | AJ250203.gene.p01 | Protein | 3e-72 | 55 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | NC_010558.1.6275971. | Protein | 2e-71 | 54 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | V00611.gene.p01 | Protein | 5e-71 | 54 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | AB084246.gene.p01 | Protein | 1e-71 | 54 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | L06798.gene.p01 | Protein | 3e-68 | 53 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | AF133139.gene.p01 | Protein | 1e-60 | 50 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | NC_010410.6002612.p0 | Protein | 2e-62 | 50 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | AF133140.gene.p01 | Protein | 2e-62 | 50 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | L06940.gene.p01 | Protein | 4e-62 | 50 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | Y19114.gene.p01 | Protein | 3e-62 | 49 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | AF070999.gene.p01 | Protein | 3e-57 | 49 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | Y19116.gene.p01 | Protein | 4e-60 | 49 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | AY264780.2.gene3.p01 | Protein | 2e-48 | 43 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | AY743590.gene.p01 | Protein | 4e-44 | 43 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | AF121000.gene.p01 | Protein | 8e-53 | 42 |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | AJ420072.gene.p01 | Protein | 1e-50 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tetH | YP_007884113.1 | tetracycline efflux protein, class H | VFG1036 | Protein | 2e-71 | 54 |
