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Name : MHH_c22820 (MHH_c22820) Accession : YP_007884079.1 Strain : Mannheimia haemolytica M42548 Genome accession: NC_021082 Putative virulence/resistance : Unknown Product : TraC-like conjugative transfer ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 2151904 - 2154741 bp Length : 2838 bp Strand : - Note : - DNA sequence : ATGTCTTTTTTAAGTGAGGTATTTTCCTCTTTCAAACCGACTAAAGCAGGGGTTATATCAAGTGAACCAAATGAAAATAC CGGTGAGTCTGACATCATTCAAAATAAAATGAGTGAGGTAAATAACGAGGTTCAACAATTAAAACGCAGTGGAAAACTCA CCCAGTCACAGCATCACCGTCGGTTATACTCACAAGAGCCCTCCTTTATCGATCATCTACCTTGGGGAGAATATTTGAAT GAGCACGGTGTGATACTCCTTGATGATGCCCGTAGTGTTGGGGCAGTATTTGATATTAAGCCGATTGGTACTGCTGGCCG TAGTATTGAATTTTTAAGTCGGATACGTAATCTTGTCAAAGATGCCTTGCAAGACAGCTTTGATGAATTGGATGTAAATC CGTACGTTGTTCAATTTTATTGCCAAGACAGCGATGATTTACAGCCTTATATTGAACAGCTACGAAATTATATCTCGCCT ATCGCTAAAAATAGTGCATTTAGCGAAGAATGGTTACGGGTACAAGCCAAGCATTTCAAGGATATCGGTAAACCAGAGGG GCTTTTTATTGATGAGCGAGTGACAAATACAGCTTGGTCTGGTCGTATACGTAGTACCAAAATGGTGATCTATCGGTATG TTGATAAATCCAATGACACTAATGAAAATCTGATTGTCGAGCAGCTGAACAATGCTTGTTCTCGCATAAATGGAGCTCTA ACAACTGCTGGATTACAATTGCAGCGACTGGATGGCGAACAATTTCGTCAATGGCTGTTACGTTGGTTTAATCCCAATCC TTCTATTAATTTTGAGGGGTTAAGCAACAATGATTGCTACCATCTTTTTGGTAAACAAACCTCAAATGACGGGCTTCCAG AATTAGCGTTTAACGATTTCAGTGAAGATTTATTTTATTCTCAACCGAAAAATGAAGGCAACTATTGGTATTTTGATGAC CAACCGCACGAAGTTGTTGTAGTCAATAATTTGAGGAAACAACCGGAAGTGGGGTTGATGACTGGCGAGATTACTCGTGG GCGTAATATCAATGCATTATTTGACTTGTTGCCGGAATCAACCATTATGGCAATTACCATCGTCATCCATCCACAGGATA AGTTGGAGGCACATTTAGAAAAAATTAGTAGTCGAGCGGTAGGTGAAAATTTTGAGTCGAAATACCTAAAAGAAGACTGT CAAACTGTACAGTCTTATCTTAAAGAGGGGCATAAACTCTATCAAGCAGCTATTGCATTTTACGTTCGAGGTAAGGATGA AAAGGAGCTACGTACCCGTTCTCGCCAGTTGAGAACGATTCTGCTCAGTAACAACCTAGAACCCGTGAAGGAAAATGCAG AAATTGCCCCACTTAACAGCTATTTGCGTTGGCTACCAATGAATTTTAATCCGCAGATGGATGCCAAATCACATTACTAC ACGAAGTACTATTTTGTACAACATTTGGCAAACTTATTACCTATCTTTGGCCGAGATACCGGGACTGGGAATCCGGGGAT CACTTACTTTAATCGAGGAGGAGCACCATTTAATTTCGACCCATTTAACCGTAAAGACAGAACCAAAAATGCTCACAAGC TATTATTAGGTCCAACCGGTTCGGGAAAATCAGCTACGTTATGTGGGCAATTATGTCAGGCTATGGCCGTTTATCGCCCA CGGACTTTTGTTGTTGAGGCAGGAAATTCATTTGGTTTATTAGCGGACTATGCAGAACGTTTCGGACTGACTGTAAATCG CATTACGTTAGCTCCAAACAGCGGCATTGTCTTACCACTCTTTTCAGAAGCACATCGTCTATTGGATATGGAATTAAACC CGGAAGATGTGCCGGAAGACATTGAGGATAACGATGACACTGATGATGAAGGTGATATGCAACGAGATTTATTGGCCGAA ATGGAGCTGACGGCACGTTTGATGATCACCGGAGGTGAAAAGAAAGAAGATGAAAAAATGAGCCGTGCTGATCGTGCTGC TATTCGTCGTGCCATTTTAAATGCAGCTCGCCAAACCAAATCTGAAGGCAGACAAACGCTGACTGAAGATATTAAAAATG CTTTGGAAGCATTAAGTCATGATGAGCATACTCGTGAAGAACGGCGTACCCGTTTAGCAGAAATGGCAGAATCATTAGAA ATGTTTTGTACCGGTGTAAATGGGCAATTTTTTAATCGAGAGGGGGCAATTTGGCCGGAGGCTGATCTAACCTTAGTTGA TTTAGCTATGTTTGCCCGGGAAGGCTATGAAGCAGAGTTGGCCATTTCCTATATTTCACTCATTAACCATATCAACAGTC TTGGTGAAAAATACCAACACAGTGATCGGATGATTCTGAATGTAACAGATGAATCACACATTATCACGGCCAACCCATTA TTAGCTAAATTCCTAGTTAAAGGCTCAAAAATGTGGCGTAAACTAGGGATTTGGCTATGGCTTGCTACTCAAAATATGGA TGACTTCCCGAATGAAGCGGCGAAATTACTCTCAATGGTCGAATGGTGGGAATTGTTGAATGTGTCTGCCAGTGAAATTG ATGAAATCAATCGTTTCCGGAAACTGTCAGAGGCCCAGAAAACGATGTTGTTATCTGCCAAAAAATCAGATCGTAAATAT ACCGAGGGCGTGGTATTAGCAACGAATATGGAAGCTCTATTCCGAGTTGTACCGCCTAGCTTATTTTTAGCTTTAGGAAT GACTGAAAAACATGAAAAAGCAGAACGTAAGCAACTGATGATGCAGCACGGCTATACCGAACTCGATGCAGCTTTAGAGG TTGCAGCTCGGATTGATAAAGCAAGAGGAATACACTAA Protein sequence : MSFLSEVFSSFKPTKAGVISSEPNENTGESDIIQNKMSEVNNEVQQLKRSGKLTQSQHHRRLYSQEPSFIDHLPWGEYLN EHGVILLDDARSVGAVFDIKPIGTAGRSIEFLSRIRNLVKDALQDSFDELDVNPYVVQFYCQDSDDLQPYIEQLRNYISP IAKNSAFSEEWLRVQAKHFKDIGKPEGLFIDERVTNTAWSGRIRSTKMVIYRYVDKSNDTNENLIVEQLNNACSRINGAL TTAGLQLQRLDGEQFRQWLLRWFNPNPSINFEGLSNNDCYHLFGKQTSNDGLPELAFNDFSEDLFYSQPKNEGNYWYFDD QPHEVVVVNNLRKQPEVGLMTGEITRGRNINALFDLLPESTIMAITIVIHPQDKLEAHLEKISSRAVGENFESKYLKEDC QTVQSYLKEGHKLYQAAIAFYVRGKDEKELRTRSRQLRTILLSNNLEPVKENAEIAPLNSYLRWLPMNFNPQMDAKSHYY TKYYFVQHLANLLPIFGRDTGTGNPGITYFNRGGAPFNFDPFNRKDRTKNAHKLLLGPTGSGKSATLCGQLCQAMAVYRP RTFVVEAGNSFGLLADYAERFGLTVNRITLAPNSGIVLPLFSEAHRLLDMELNPEDVPEDIEDNDDTDDEGDMQRDLLAE MELTARLMITGGEKKEDEKMSRADRAAIRRAILNAARQTKSEGRQTLTEDIKNALEALSHDEHTREERRTRLAEMAESLE MFCTGVNGQFFNREGAIWPEADLTLVDLAMFAREGYEAELAISYISLINHINSLGEKYQHSDRMILNVTDESHIITANPL LAKFLVKGSKMWRKLGIWLWLATQNMDDFPNEAAKLLSMVEWWELLNVSASEIDEINRFRKLSEAQKTMLLSAKKSDRKY TEGVVLATNMEALFRVVPPSLFLALGMTEKHEKAERKQLMMQHGYTELDAALEVAARIDKARGIH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Pmu_03070 | YP_005176206.1 | conjugative transfer ATPase TraC-like, PFL family | Not tested | ICEPmu1 | Protein | 0.0 | 100 |
| virB4 | CAI36125.1 | VirB4 component | Not tested | PPHGI-1 | Protein | 0.0 | 52 |
| YE3482 | YP_001007641.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 51 |
| api39 | CAF28513.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 51 |
| YpsIP31758_3705 | YP_001402659.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 51 |
| unnamed | ABR13362.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 50 |
| ORF C47 | AAN62141.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 50 |
| ORF SG57 | AAN62279.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 50 |
| STY4573 | NP_458658.1 | hypothetical protein | Not tested | SPI-7 | Protein | 4e-173 | 49 |
| PMI2576 | YP_002152295.1 | hypothetical protein | Not tested | Not named | Protein | 0.0 | 49 |
| RL022 | AAP84149.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 0.0 | 47 |
| EXA33 | ABD94642.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 0.0 | 47 |
