Gene Information

Name : shlB (MHH_c19870)
Accession : YP_007883789.1
Strain : Mannheimia haemolytica M42548
Genome accession: NC_021082
Putative virulence/resistance : Unknown
Product : hemolysin transporter protein ShlB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1863195 - 1864991 bp
Length : 1797 bp
Strand : +
Note : -

DNA sequence :
ATGTCTTACTTATTTGATCTTATGAAAACCCCACAAAATCTGATTTTAAGCACGGTATTGTTAAGTGCTTCTTTTGTTGC
TGAAGCAAATTCTTCAAGCCTTGTACAACAAGCACGCATTGATGCAACTCAACAACAAATTGATGCTGCCCAGCAACATC
GCCAACAGCAATACCAACAAAATCAAGCAGAAAAATTCCAGCCGAAAGCTGATGTACGGCTCGAGACACAAATCAATGAT
ACACTTACTCTTTCCAATCACGAATTGCCTTGTTACCCCATTCATCAAATCACTCTCATTGACTATTCTCCTGACAATTC
TCTGACTACCAGCCAATTCCAATGGGCGTTTGAAAAAGCAGTAAAATCATTTCATTTGACATTACCTCACTGCTTTGGTG
GTGAAGGGTTAGCTGTGTTGATGAAGCAAATCCAAAATGAAATTATTGGCAAAGGTTATGTCACTACACGAGTGGTTACT
GCGGAGCAAGATTTACGTGGCGGAAAATTAGTTTTAACCGTGATTCCGGGCAAAATACGCAATACTTTAGTGGTAGATAG
CGGCAAAGTACCGCGTTTTACCAAGCTGCACGCCTTAACCGGTTTTACTTTTGCCGAAGGCGATATTCTGAATGTGCGAG
ATATTGAGCAGTCTCTGGAAAATCTAAAACGGGTGCCGACGGCGGAGGCAAATATTGAGATTTTACCCAGCTCAAGCGAA
AAAGCGGAGGTGGGAGACAGTGATTTAAAAATCAGCTATTCGCAAGCGTTTCCATTTCGCTTAAATCTTGGGCTGGACGA
TGCCGGCTCGAAATCCACAGGCAAATTACAAACCTCCGCCACTCTGTCTATAGATAATATTTTTTCGGCAAATGACCTGT
TCTATACCTCTTTTACCCATTCGATGAAACAAAAAGGTGATGATAACGGCAGACGTGCCAGTAAAAATCTCACGCTTTAC
TATTCCGTGCCGTTTGGCTATTGGCAGTTAGCATTTTCACACACTCATCATCGTTATCATCAAGAAGTATTTGGTGCCTT
TGACAAGAGCTATCTCTACGCCGGTGAAAGTGATACCGATAAATTAACCTTTTCTTATTTGCTTTATCGTGATGCCAAAC
GTAAAACGAGCTTGTCCGGTTCACTTTGGCCACGCCAGTCGCAAAACTATATTGACGGCTCAGAAATTGAAGTACAAAAA
CGCCGAATGGCAGGTTGGGAAGCGGGTTTTTCGCATAAAGAATATTTCCCGACCGCTACGCTTGAGCTTTCGGCTAATTT
CAAACGAGGTACGGCAGCACGAGGGGCATTATCTGCTCCCGAGGAAGATTATGGCGAAGGGACTTCTCGCCCTAAAATCA
TCACGGCAAGTGCAAGCCTGACGAAACCGTTTTTTTGGGGCAAGCAGCCATGGCAGTGGCAAAGTAGCCTAAATGCCCAA
TGGAATAAAACCCCTCTGGTTCCGCAAGACCGTTTTTCGATTGGCGGGCGTTACACCATACGTGGATTTGACGGTGAACT
GACTCTTTCCGGTGAGCGGGGCTGGAACTGGCGTAATGAGTTGAGCTGGCAATTTAATCCGAACCACGCTTTTTATTGGG
CGGTAGATGGTGGTCGAGTGTCCGGTTGGGCAACGGAAAATCAGCTCGGACATCATTTAATGGGAACAGCCATTGGGTTT
CGGGGTGGAGTTAAAGGATTTAGTTATGACGTGTTTGCCGGTAGACCGATGCGAAAACCGGAAGGGTTTAAAACCTCAGA
CACCGTTGCCGGTTTTAATATTGGTTACAATTTTTAA

Protein sequence :
MSYLFDLMKTPQNLILSTVLLSASFVAEANSSSLVQQARIDATQQQIDAAQQHRQQQYQQNQAEKFQPKADVRLETQIND
TLTLSNHELPCYPIHQITLIDYSPDNSLTTSQFQWAFEKAVKSFHLTLPHCFGGEGLAVLMKQIQNEIIGKGYVTTRVVT
AEQDLRGGKLVLTVIPGKIRNTLVVDSGKVPRFTKLHALTGFTFAEGDILNVRDIEQSLENLKRVPTAEANIEILPSSSE
KAEVGDSDLKISYSQAFPFRLNLGLDDAGSKSTGKLQTSATLSIDNIFSANDLFYTSFTHSMKQKGDDNGRRASKNLTLY
YSVPFGYWQLAFSHTHHRYHQEVFGAFDKSYLYAGESDTDKLTFSYLLYRDAKRKTSLSGSLWPRQSQNYIDGSEIEVQK
RRMAGWEAGFSHKEYFPTATLELSANFKRGTAARGALSAPEEDYGEGTSRPKIITASASLTKPFFWGKQPWQWQSSLNAQ
WNKTPLVPQDRFSIGGRYTIRGFDGELTLSGERGWNWRNELSWQFNPNHAFYWAVDGGRVSGWATENQLGHHLMGTAIGF
RGGVKGFSYDVFAGRPMRKPEGFKTSDTVAGFNIGYNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB1762 NP_274762.1 hemolysin activation protein HecB Not tested IHT-C Protein 7e-99 42
S1 AAQ19124.1 putative hemolysin activator HlyB Not tested PAI I CL3 Protein 1e-80 41