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Name : MHH_c18550 (MHH_c18550) Accession : YP_007883659.1 Strain : Mannheimia haemolytica M42548 Genome accession: NC_021082 Putative virulence/resistance : Unknown Product : capsid protein N Function : - COG functional category : - COG ID : - EC number : - Position : 1742271 - 1743299 bp Length : 1029 bp Strand : + Note : - DNA sequence : ATGAAAGATTTAACCCTTGAAAAATATAACGCCTACCTTGCACGCCAAGCTGAATTAAACAACTTGCCGTTTAATGCATT GGCAACCGGCATTAAATTCACAGTGCAACCATCGGTACAGCAAAAGCTGTATGAAAAGGTGCGTGAAAGCTCTGATTTCT TAAAATCTATCAGCTTTGTGTTTGTTGATGAGCAAACCGGTGAAACCTTAGGTTTAGATTCAGCTCACACCGTGGCCAGC ACCACCGATACCAGCGGTGACGGTGAACGCAAAACCACCTCTATTGCGAAGTTGGTAAAACAAACCTACCACTGCCAACA AATCAATTTTGACACCCATATCAATTATAAACAGTTGGATATGTGGGCGAAATTCCCTGATTTTCAGCAAAAAGTGGCGA ATGTTGCGGCAAAACAACGCAAACGTGACTTAATTATGATCGGCTTTAACGGCACAAGTCGTGCGGCAACCAGTGATCGC AACAGCAACCCGTTATTGCAAGATGTGGCAAAAGGCTGGTTGCAGAAAATGCGTGAAGATGCCAAAGAGCGTGTAATGAA TGGCGAAAGCACAGACAACCAAGTTTTAGTCGGCAAAGGTCAAGAGTATGCCAATCTTGACGCACTCGTAATGGACGCCA CCGAAGAACTTATTGATGAATGGCATCGTGATGACACCGATTTAGTGGTGATTACCGGTCGCAAGTTGCTTGCGGATAAA TATTTCCCGATTGTGAATCAGCAAAACGCACCAACCGAAGAACTTGCCGCTGATATTGTGATCTCACAAAAACGCATTGG GGGCTTAAAAGCGGTGCGTGTGCCGTTCTTCCCGGCGAATGCGATTTTAATCACTAAGCTGGAAAATTTAGCCATCTATG TGCAAGAGGGGACAACCCGCAAGCATATTGAGAACGTGCCGAAAAAAGACCGTATTGAAACCTACGAATCAGAAAATATC GACTACGTTGTCGAAGATTATGGCTGTGCGGCATTAATCGAAAACATTACACTCAAAGATAAAGAGTAA Protein sequence : MKDLTLEKYNAYLARQAELNNLPFNALATGIKFTVQPSVQQKLYEKVRESSDFLKSISFVFVDEQTGETLGLDSAHTVAS TTDTSGDGERKTTSIAKLVKQTYHCQQINFDTHINYKQLDMWAKFPDFQQKVANVAAKQRKRDLIMIGFNGTSRAATSDR NSNPLLQDVAKGWLQKMREDAKERVMNGESTDNQVLVGKGQEYANLDALVMDATEELIDEWHRDDTDLVVITGRKLLADK YFPIVNQQNAPTEELAADIVISQKRIGGLKAVRVPFFPANAILITKLENLAIYVQEGTTRKHIENVPKKDRIETYESENI DYVVEDYGCAALIENITLKDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 1e-79 | 54 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 1e-79 | 54 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 4e-74 | 48 |
