Gene Information

Name : MHH_c18520 (MHH_c18520)
Accession : YP_007883656.1
Strain : Mannheimia haemolytica M42548
Genome accession: NC_021082
Putative virulence/resistance : Unknown
Product : capsid portal protein Q
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1738429 - 1739469 bp
Length : 1041 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAACAATTGCGCAAAAATTTAACCCAAAATGACCGCTTACAACCGCAAGCACAAACCGAAATTTTCAGTTTTGG
TGACCCGATTCCGGTGTTAGACCGTGCCGATATTCTCAATTATTTGGAGTGTTCGGCGATGTATGAGAAATGGTATAACC
CACCGATGAGCTTTGATGGCTTGGCGAAATCGTTAAGGTCATCAACACACCACGAAAGTGCGATCATCACCAAAGCAAAT
ATTTTGCTTTCCACTTGCGAGGTTGATAGCCGTTATTTATCACGCCGTGATTTGTCATCGTTTGTTAAAGATTATTTAGT
ATTTGGCAACGCCTATTTTGAGGTGGTGCGAAATCGCCTTGGGCAGGTACAGCGAATCGAATCACCTTTGGCAAAATATG
TGCGAAAGGGTTTAGAGGCTGGTCAATTTTACTATGTGCCACAACGATTCGATCACCAAGAACACGAATTTGCCAAAGGC
TCAATCTATCACTTGCTTGAGCCTGATATTAATCAAGATATTTACGGCTTGCCACAATATCTTTCGGCCCTGCAATCTGC
GTGGTTAAATGAGAGTGCTACTCTGTTTCGCCGTAAGTATTTTTTAAATGGAGCTCACGCCGGCTTTGTGTTTTATATGA
GCGATGCGTCACAAAAACAAGAAGATGTTGAAAATATTCGCCAGCAGCTCAAGCAGTCAAAAGGGGTGGGGAATTTTAAA
AACTTGTTCGTCCACGCACCAAACGGCAAGAAAGATGGAATACAGATTATTCCGATTGCTGATGTGTCGGCAAAAGATGA
GTTTTTTAATATCAAGAACGTGAGCCGTGATGATGTGTTAGCTGCTCACCGTGTGCCACCACAACTGATGGGGATTATCC
CAAATAACACCGGCGGTTTTGGCAACGTGGCTGATGCTGCCGAGGTGTTTTTTATCACCGAGATTGAGCCATTGCAAGAG
CGATTGAAAGAGTTTAATCAGTGGTTAGGTCAAGAGGTTATCAAATTTAAACCGTCTAAATTGTTACAGCGGACACAATA
A

Protein sequence : 
MKKQLRKNLTQNDRLQPQAQTEIFSFGDPIPVLDRADILNYLECSAMYEKWYNPPMSFDGLAKSLRSSTHHESAIITKAN
ILLSTCEVDSRYLSRRDLSSFVKDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQFYYVPQRFDHQEHEFAKG
SIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQKQEDVENIRQQLKQSKGVGNFK
NLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSRDDVLAAHRVPPQLMGIIPNNTGGFGNVADAAEVFFITEIEPLQE
RLKEFNQWLGQEVIKFKPSKLLQRTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 5e-97 61
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 5e-97 61
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 4e-77 55