Gene Information

Name : K649_02770 (K649_02770)
Accession : YP_007879353.1
Strain : Meiothermus ruber DSM 1279
Genome accession: NC_021081
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 535467 - 536186 bp
Length : 720 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
GTGCGCGACCTGACCGTGGTCTACCGGGAGAAGCCAGCCTTGTGGGATGTGGATCTGGAAGTACCCACCGGGCAGCTTTG
CGCCATTGTGGGCCCCAACGGGGCGGGCAAATCCACCCTGATTAAGGCAGTCCTGGGGCTGGTGCCGGTGGCCTCGGGGC
AGGTGCGCTTTTTTGGCCAGAGCCTGGCACAGGCCCGCAAACGCATCGGCTATGTGCCCCAGCGGGGCTCGGTGGACTGG
GATTTCCCCACCAGCGTACTGGACGTGGTCATGATGGGGCTTTACGGCCAGTTGGGCTGGTTCAAGCGGCCCGGCCCGCG
CGAGCGCGAGGCAGCCCTGCGCTGCCTGGAGCAGGTCTCGATGCAGGCCTTTACCACCCGCCAGATCTCGCAGCTATCCG
GCGGCCAGCAGCAGCGGGTGTTTCTGGCCCGGGCCCTGGCCCAGGATGCCGATCTCTACTTTATGGACGAGCCCTTCGCT
GGGGTGGATGCCGTTACCGAAGAGGCCATCCTGCGGGTACTGCACGAGCTTAAGAAGCAGGGTAAAACCGTGGTGGTGGT
ACACCACGACCTGGAAACCGTGCGCGATTACTTCGACCACCTGACCCTGCTGAACGTGCAGGTAATAGCCAGCGGGCCGA
TGGAAGAGGTGTTTACACCCGAGAACCTAAAACGAACCTACGGGGAGCGGATGCGGTGGGGGGAAAGGCACAGCGCATGA

Protein sequence : 
MRDLTVVYREKPALWDVDLEVPTGQLCAIVGPNGAGKSTLIKAVLGLVPVASGQVRFFGQSLAQARKRIGYVPQRGSVDW
DFPTSVLDVVMMGLYGQLGWFKRPGPREREAALRCLEQVSMQAFTTRQISQLSGGQQQRVFLARALAQDADLYFMDEPFA
GVDAVTEEAILRVLHELKKQGKTVVVVHHDLETVRDYFDHLTLLNVQVIASGPMEEVFTPENLKRTYGERMRWGERHSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-48 46
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-48 46
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-50 46
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 9e-50 46
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 9e-50 46
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-50 46
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-50 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K649_02770 YP_007879353.1 ABC transporter BAC0400 Protein 1e-72 64
K649_02770 YP_007879353.1 ABC transporter BAC0350 Protein 2e-50 46
K649_02770 YP_007879353.1 ABC transporter BAC0440 Protein 1e-48 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K649_02770 YP_007879353.1 ABC transporter VFG0526 Protein 2e-50 46