Gene Information

Name : K649_10425 (K649_10425)
Accession : YP_007880874.1
Strain : Meiothermus ruber DSM 1279
Genome accession: NC_021081
Putative virulence/resistance : Virulence
Product : periplasmic binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2079890 - 2080792 bp
Length : 903 bp
Strand : +
Note : COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component

DNA sequence :
ATGAAAAGAGCCTGGGTGCTACTTTTTGTGGCGAGCCTGGCCACAACAGCGCTGGGACAGACCTGCCAGGGCCGGTTAAT
TCAGCACGCAATGGGCGAAACCTGCGTGCCCAAGGTAGCCCAGCGGGTTGTGGTGCTGGACACCGGCGAACTCGACAGCG
CGCTGGCCCTTGGCGTTAAACCGGTTGGGGCGGTCACCGCGCCGGGCCAGCCATTTCAAGGCTACTTGCTGAGCCTAACC
GAGGGGATTCAGTCGGTGGGCACCATCCAGCAGCCTAATTTGGAGAAAATACTGGCCCTAAAGCCCGACCTTATTCTCAG
TAACAAGCTGCGGCACGGTCAGATTTATCCGCAGCTTTCGCGCATCGCCCCTACTGTAATGGCCGAGACGGTGGGGGTGG
TTTGGAAGGAGAACTTGCTTCTGGTGGGAGAAGCCCTGGGACGAAGCACCCAGGCCAAGGTGTTGCTGGCCCAGTACCAG
CGGCGGGTCACCCAGTTGCGCAACCGCCTGGGGGGTCGTGGGCACCTGCCAAGCGTGAGCATGGTACGTTTCGTTCCGGG
CCAGATTCGCCTGTACTGCAAGGCCAACTTCATCGGCACCATCCTGGCGGATATAGGTTTGCCCAGGCCCAAGAGCCAGG
ACAGCGACAAGTTCGCCGAGTTTATCTCTCAAGAACGCATCGCCGATATGGATGCCGACTACATCTTTTACGCCGCCTAT
GGGGATCCCAACCAAACTGAGCTGAACGCGGTGCTAAACCATCCCCTATGGCGCCGTTTATCCGCGGTGCAGCGTGGGCG
GGCTATACGGGTTGAGGACGACCACTGGTATCTGGGCATAGGGCCGCTGGCAGCCAGCCAGGTGCTGGATGACCTGGAAC
GGTTCTTGTTGAGAACCCCCTAG

Protein sequence :
MKRAWVLLFVASLATTALGQTCQGRLIQHAMGETCVPKVAQRVVVLDTGELDSALALGVKPVGAVTAPGQPFQGYLLSLT
EGIQSVGTIQQPNLEKILALKPDLILSNKLRHGQIYPQLSRIAPTVMAETVGVVWKENLLLVGEALGRSTQAKVLLAQYQ
RRVTQLRNRLGGRGHLPSVSMVRFVPGQIRLYCKANFIGTILADIGLPRPKSQDSDKFAEFISQERIADMDADYIFYAAY
GDPNQTELNAVLNHPLWRRLSAVQRGRAIRVEDDHWYLGIGPLAASQVLDDLERFLLRTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 5e-58 45
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 4e-58 45
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 4e-58 45
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 4e-58 45