Gene Information

Name : K649_07650 (K649_07650)
Accession : YP_007880325.1
Strain : Meiothermus ruber DSM 1279
Genome accession: NC_021081
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1546664 - 1547377 bp
Length : 714 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
GTGACGGTGGTCTCCCTGCAGCAGGTGCGCAAGGTGTACAAAAGCGGGGCGCTCGAGTTTGAGGCCCTCAAGGGGGTTTC
GCTGGAGATTCGCCAGGGCGAGATGGTGGCCCTGATGGGGCCTTCGGGCTCGGGCAAAACCACCCTGATGCAGATCATCG
GCCTGCTCGACCGCCCCACCGAGGGGCGCTATATCCTGGCCGGGCGGGACGTCACCACCCTGACCGAAAACGAGCGGGCC
GAAGTGCGCAACCAGGAGATCGGCTTTGTTTTTCAGGCTTTTCACCTGTTGCCGCGTCTGAGCGTGCTGGAGAATGTGGA
GGTGCCCCTCACCTACGCCGGTTATGGCCCCCAGGAGCGGCGGGAGCGGGCCCTCGAGGTGCTGCAAAAGGTGGGACTGG
GCAACAAGCTCAAGAACCTGCCCTCCCAGCTTTCGGGCGGCCAGAAGCAGCGGGTGGCCATCGCCCGGGCCCTGACCATG
CGCCCCTCCATCCTGCTGGCCGACGAGCCGACCGGCAACCTCGACTCCAAGACCGCCGTAGAGGTCATGCGGCTGTTTCA
GGAGCTCAACGATGAGGGCACCAGCGTGATTATCGTGACCCACGAGCCCGATATCGCCGAGTACACCGGGCGCATCGTGC
GCATCCGGGACGGACAGATCGAGTCCGACGGCCCCAACCCCCACCGCAAACGGGCTGTAGGAGGTGTGGCATGA

Protein sequence : 
MTVVSLQQVRKVYKSGALEFEALKGVSLEIRQGEMVALMGPSGSGKTTLMQIIGLLDRPTEGRYILAGRDVTTLTENERA
EVRNQEIGFVFQAFHLLPRLSVLENVEVPLTYAGYGPQERRERALEVLQKVGLGNKLKNLPSQLSGGQKQRVAIARALTM
RPSILLADEPTGNLDSKTAVEVMRLFQELNDEGTSVIIVTHEPDIAEYTGRIVRIRDGQIESDGPNPHRKRAVGGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K649_07650 YP_007880325.1 ABC transporter NC_012469.1.7686878. Protein 4e-60 56
K649_07650 YP_007880325.1 ABC transporter NC_008702.1.4606598. Protein 9e-48 52
K649_07650 YP_007880325.1 ABC transporter CP001581.1.gene798.p Protein 9e-37 43
K649_07650 YP_007880325.1 ABC transporter CP001581.1.gene598.p Protein 6e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
K649_07650 YP_007880325.1 ABC transporter VFG0869 Protein 1e-25 42