Gene Information

Name : RORB6_04365 (RORB6_04365)
Accession : YP_007873118.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1001648 - 1002469 bp
Length : 822 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGCCACAGCGGGTGATGCCTGCAGAGCAGGGAATCGTGCTGGATTCCCTGTCGGCCGGATACGGCCAGACCCTGATTGT
CGATGATATTCAGTTGACGATCCCTCACGGTAAAATGACGGTACTGGCCGGGGCTAACGGCTCCGGTAAATCTACCTTGC
TGTCGACGATTGCCCGCATGCTGAAACCGCTTGGCGGCAGCGTGCGTCTGGATGGTCAGACGATTCACACTATGCCGACC
CGGGCGGTTTCACGTCAGCTGGGGATTCTGCCTCAGTCGCCGCTCACTCCCGAAGGATTAACGGTCTTTGAGCTGGTTTC
CCGCGGTCGCTACCCCTGGCAGGGATTGATGCGCCAGTGGTCAGATGCCGACGAGCGGGCGGTAGAAGAGGCGATGGCGT
TGACCGGCACCGCCGAATTTGCCCATCTGCCGGTAGACAGCCTCTCCGGTGGCCAGCGCCAGCGCTGCTGGATTGCGATG
GCGCTGGCGCAGGAAACGCCGACGATTCTGCTGGACGAGCCGACCACCTGGCTCGATTTGCGCTATCAGGTCGATATCCT
CGAACTGCTGCAAACCCTGACCCGTGACCATGGACGCACGGTGGTCACCGTGCTGCACGACCTTAACTTTGCGGTGAACT
ATGCCGATATCCTGGTGTTCCTCAAGAAAGGGCGTATTGCCGGGATCGTGGACGAAAACGCCAGCTGTACCCCGGAGCTG
ATCAAAACCGTGTTTGACGTTGAGGTCCAGATGTCGCTCAACCCGCAGACCGGTAAACCCTTTTTTATGCCCTTTCGCGC
GCGGCAGGAGGAAGCCCAATGA

Protein sequence : 
MPQRVMPAEQGIVLDSLSAGYGQTLIVDDIQLTIPHGKMTVLAGANGSGKSTLLSTIARMLKPLGGSVRLDGQTIHTMPT
RAVSRQLGILPQSPLTPEGLTVFELVSRGRYPWQGLMRQWSDADERAVEEAMALTGTAEFAHLPVDSLSGGQRQRCWIAM
ALAQETPTILLDEPTTWLDLRYQVDILELLQTLTRDHGRTVVTVLHDLNFAVNYADILVFLKKGRIAGIVDENASCTPEL
IKTVFDVEVQMSLNPQTGKPFFMPFRARQEEAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-46 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-49 46
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-48 46
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-48 46
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-48 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-48 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-45 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-48 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-48 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-48 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-48 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_04365 YP_007873118.1 transporter BAC0164 Protein 5e-46 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_04365 YP_007873118.1 transporter VFG1042 Protein 5e-46 46
RORB6_04365 YP_007873118.1 transporter VFG0925 Protein 2e-52 46