Gene Information

Name : ldcA (RORB6_03295)
Accession : YP_007872907.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Unknown
Product : L,D-carboxypeptidase A
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.17.13
Position : 760437 - 761351 bp
Length : 915 bp
Strand : -
Note : COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

DNA sequence :
ATGTCTCAGTTTTATCTGGTCGCCCCTTCAGGTTACTGCCTCAACCAGGAGGCAGCGTACCGCGGCGTTCAACGTCTGCA
GGAAGCCGGGCATCAGGTCCTGCACCAGGAGGTCATCCCTCGCCGCCAGCAGCGGTTTGCCGGAACTGAGCATCAGCGCC
TGAACGACATCAACCAGCTGGCTACCCTCGAAGGCGCTAATCGTATCGTGCTGGCGGTACGCGGCGGCTACGGCGCCAGC
CGCCTGCTGCCGCACATCGACTGGCAGGCCCTCGTTGCACGCCAGCGGCAGAACCCGCTAATCATTTGCGGACACAGCGA
TTTTACAGCGATTCAGATGGGCCTGCTGGCAAAGGGTAGCATAATCACCTTCAGCGGTCCGATGCTGGCCGGTAACTTTG
GCGCCGAAGCGATGGATCCGTTTACTGAACGCCACTTCTGGCAAGCGCTGCGCAGCCCGGAATTTACCCTCGAATGGCAG
GGCGAAGGCCCGGATTGTCGGGCCCAGGGAACCCTGTGGGGCGGCAATCTGGCGATGATAACCTCGCTGATTGGCACGCC
GTGGCTACCGCAAATCGCCAACGGTATTCTGGTGCTGGAAGATATTAATGAACATCCGTTCCGCGTCGAACGAATGCTGT
TGCAGCTGCTCAATAGTGGTATCCTCGCGAATCAGCGCGCCATTGTCCTCGGCAGCTTTACCGGTGCCCGGCCTAACGAT
TACGACGCGGGCTATGATTTACCGCAGGTCTGTGACTATCTTCGCACCCAGCTCGATGTTCCGCTCATCAGCGGCCTGGA
CTTCGGCCACGAGCAGCAGACCGTGACTCTGCCCCTCGGCGCGGAGGCGCTGCTGGTGAACAACGCGGCCACCACCACCT
TAACGCTCAGCGGACATCCGGTACTGACAGAATAA

Protein sequence :
MSQFYLVAPSGYCLNQEAAYRGVQRLQEAGHQVLHQEVIPRRQQRFAGTEHQRLNDINQLATLEGANRIVLAVRGGYGAS
RLLPHIDWQALVARQRQNPLIICGHSDFTAIQMGLLAKGSIITFSGPMLAGNFGAEAMDPFTERHFWQALRSPEFTLEWQ
GEGPDCRAQGTLWGGNLAMITSLIGTPWLPQIANGILVLEDINEHPFRVERMLLQLLNSGILANQRAIVLGSFTGARPND
YDAGYDLPQVCDYLRTQLDVPLISGLDFGHEQQTVTLPLGAEALLVNNAATTTLTLSGHPVLTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
f304 AAC61707.1 F304 Not tested PAI I CFT073 Protein 2e-103 70