Gene Information

Name : RORB6_02525 (RORB6_02525)
Accession : YP_007872753.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : yersiniabactin-iron transporter permease YbtX
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 599721 - 601001 bp
Length : 1281 bp
Strand : +
Note : COG0477 Permeases of the major facilitator superfamily

DNA sequence :
ATGAGTGACCTTCAGTCGAATGTGAAACCGCTGACGTTAACAACCGGGCGGGTGATTTTTGCTATTGCCGGCGTTTATGT
GACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCCTTACCCGCGCTGGTGCGCGCTGCCGGCGGATCGCTGGCGCTTG
CTGGGGCGACAACGCTGTTTATGTTGCCCTGGGCGCTGAAGTTTATTTGGGCGCCGTGGATCGAGCGCTGGCGGCTCCCG
CCCGATAGTCCGGAGCGCCGTTCCCGCATGTTAATCCTGCGTGGTCAGGTCGCGTTAGCGGCGCTCCTGATGATGGCCGC
AGCGATCGGCTGGTTCGGGCGAGAAGGGGGATTTCCCGATACGCAAATCGTGGCGTTATTTGTGCTGTTCATGGTGGCAG
GCACGGTCGCCTCCACCATTGATATCGCCAGCGACGGTTTTTGCGTCGATCAGCTGACCCGCGCGGGTTATGGCTGGGGA
AACAGCGTGCAGGTTGGCGGTAGCTATCTGGGGATGATGTGCGGTGGCGGGGTGTTCCTGATGCTGTCGGCGGCATCCGG
CTGGCCTGTCGCCATGCTGATCATGGCGCTGCTGATTATGGTGTTATCACTCCCGCTGTGGCGCATTACGGAGCCGACGC
GAACGGTGACGGTCCCGCATGTTCCGGCGTTAGGTTATGCGCTAAGGCGAAGACAGGCGCGTCTGGGCTTACTGCTGGTA
TTGATGCTGAATTCCGGTATGCGGTTTGTGCTGCCTCTTCTGGCGCCGCTGTTGTTGGATCATGGGCTGAGTATGTCAGC
GCTGGGTGCGCTGTTTAGCGGCGGTAATATTGCGGCGGGCATAGCAGGAACGCTGGCCGGCGGATTACTGATGAAGTACA
CCTCACCCGGCAGAGCGCTGTTGACGGCTTATGGCGTCCAGGGGATCGCACTGCTGGCGGTGGTGGTGACGCTGAAGATG
GCGCCGGGTCATCTGCTGCTGCCCGTTCTCCAGTGTCTGGTCATTATCCAGTCCATTTCGCTGGCCTGCGCGCTGGTCTG
TCTTTATGCCACGCTGATGTCGCTTTCATCACCCTTACAGGCCGGCGTCGACTTCACCCTCTTTCAATGTACTGACGCGG
CAATCGCCATTCTGGCTGGCGTTGTCGGCGGCATTGTGGCCCAACATTTTGGCTATGCGGCCTGCTTCCTGTTTGCCGGG
ATATTCACGTTACTGGTGGCGTGGGTTGCCCATATCCGGCTGCATTCGGCAAGCAAACTGATGACCAGCTCAATTGATTG
A

Protein sequence :
MSDLQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSLPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLP
PDSPERRSRMLILRGQVALAALLMMAAAIGWFGREGGFPDTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRAGYGWG
NSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLIMALLIMVLSLPLWRITEPTRTVTVPHVPALGYALRRRQARLGLLLV
LMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAAGIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVVTLKM
APGHLLLPVLQCLVIIQSISLACALVCLYATLMSLSSPLQAGVDFTLFQCTDAAIAILAGVVGGIVAQHFGYAACFLFAG
IFTLLVAWVAHIRLHSASKLMTSSID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp8 YP_002346906.1 signal transducer Not tested HPI Protein 6e-126 95
ybtX YP_070128.1 MFS superfamily transporter signal transducer Virulence HPI Protein 6e-126 95
ybtX CAA21386.1 - Virulence HPI Protein 3e-125 95
ybtX NP_669702.1 hypothetical protein Virulence HPI Protein 2e-125 95
ybtX NP_993011.1 signal transducer Virulence HPI Protein 2e-125 95
irp8 YP_001006811.1 putative signal transducer Not tested HPI Protein 3e-125 94
ybtX YP_853071.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 6e-125 94
irp8 CAB46571.1 signal transducer, Irp8 Virulence HPI Protein 2e-124 94