|
Name : RORB6_02525 (RORB6_02525) Accession : YP_007872753.1 Strain : Raoultella ornithinolytica B6 Genome accession: NC_021066 Putative virulence/resistance : Virulence Product : yersiniabactin-iron transporter permease YbtX Function : - COG functional category : - COG ID : - EC number : - Position : 599721 - 601001 bp Length : 1281 bp Strand : + Note : COG0477 Permeases of the major facilitator superfamily DNA sequence : ATGAGTGACCTTCAGTCGAATGTGAAACCGCTGACGTTAACAACCGGGCGGGTGATTTTTGCTATTGCCGGCGTTTATGT GACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCCTTACCCGCGCTGGTGCGCGCTGCCGGCGGATCGCTGGCGCTTG CTGGGGCGACAACGCTGTTTATGTTGCCCTGGGCGCTGAAGTTTATTTGGGCGCCGTGGATCGAGCGCTGGCGGCTCCCG CCCGATAGTCCGGAGCGCCGTTCCCGCATGTTAATCCTGCGTGGTCAGGTCGCGTTAGCGGCGCTCCTGATGATGGCCGC AGCGATCGGCTGGTTCGGGCGAGAAGGGGGATTTCCCGATACGCAAATCGTGGCGTTATTTGTGCTGTTCATGGTGGCAG GCACGGTCGCCTCCACCATTGATATCGCCAGCGACGGTTTTTGCGTCGATCAGCTGACCCGCGCGGGTTATGGCTGGGGA AACAGCGTGCAGGTTGGCGGTAGCTATCTGGGGATGATGTGCGGTGGCGGGGTGTTCCTGATGCTGTCGGCGGCATCCGG CTGGCCTGTCGCCATGCTGATCATGGCGCTGCTGATTATGGTGTTATCACTCCCGCTGTGGCGCATTACGGAGCCGACGC GAACGGTGACGGTCCCGCATGTTCCGGCGTTAGGTTATGCGCTAAGGCGAAGACAGGCGCGTCTGGGCTTACTGCTGGTA TTGATGCTGAATTCCGGTATGCGGTTTGTGCTGCCTCTTCTGGCGCCGCTGTTGTTGGATCATGGGCTGAGTATGTCAGC GCTGGGTGCGCTGTTTAGCGGCGGTAATATTGCGGCGGGCATAGCAGGAACGCTGGCCGGCGGATTACTGATGAAGTACA CCTCACCCGGCAGAGCGCTGTTGACGGCTTATGGCGTCCAGGGGATCGCACTGCTGGCGGTGGTGGTGACGCTGAAGATG GCGCCGGGTCATCTGCTGCTGCCCGTTCTCCAGTGTCTGGTCATTATCCAGTCCATTTCGCTGGCCTGCGCGCTGGTCTG TCTTTATGCCACGCTGATGTCGCTTTCATCACCCTTACAGGCCGGCGTCGACTTCACCCTCTTTCAATGTACTGACGCGG CAATCGCCATTCTGGCTGGCGTTGTCGGCGGCATTGTGGCCCAACATTTTGGCTATGCGGCCTGCTTCCTGTTTGCCGGG ATATTCACGTTACTGGTGGCGTGGGTTGCCCATATCCGGCTGCATTCGGCAAGCAAACTGATGACCAGCTCAATTGATTG A Protein sequence : MSDLQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSLPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLP PDSPERRSRMLILRGQVALAALLMMAAAIGWFGREGGFPDTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRAGYGWG NSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLIMALLIMVLSLPLWRITEPTRTVTVPHVPALGYALRRRQARLGLLLV LMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAAGIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVVTLKM APGHLLLPVLQCLVIIQSISLACALVCLYATLMSLSSPLQAGVDFTLFQCTDAAIAILAGVVGGIVAQHFGYAACFLFAG IFTLLVAWVAHIRLHSASKLMTSSID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp8 | YP_002346906.1 | signal transducer | Not tested | HPI | Protein | 6e-126 | 95 |
| ybtX | YP_070128.1 | MFS superfamily transporter signal transducer | Virulence | HPI | Protein | 6e-126 | 95 |
| ybtX | CAA21386.1 | - | Virulence | HPI | Protein | 3e-125 | 95 |
| ybtX | NP_669702.1 | hypothetical protein | Virulence | HPI | Protein | 2e-125 | 95 |
| ybtX | NP_993011.1 | signal transducer | Virulence | HPI | Protein | 2e-125 | 95 |
| irp8 | YP_001006811.1 | putative signal transducer | Not tested | HPI | Protein | 3e-125 | 94 |
| irp8 | CAB46571.1 | signal transducer, Irp8 | Virulence | HPI | Protein | 2e-124 | 94 |
| ybtX | YP_853071.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 6e-125 | 94 |
