|
Name : RORB6_02520 (RORB6_02520) Accession : YP_007872752.1 Strain : Raoultella ornithinolytica B6 Genome accession: NC_021066 Putative virulence/resistance : Virulence Product : Inner membrane ABC-transporter YbtQ Function : - COG functional category : - COG ID : - EC number : - Position : 597926 - 599728 bp Length : 1803 bp Strand : + Note : COG1132 ABC-type multidrug transport system, ATPase and permease components DNA sequence : ATGGAAGACAATAATCCTGCGGATAACCTGGCCTGGCGCGTCATCTGGCGTCAGCTTATCTCCAGCGTTGGCAGCCAGGC CGGGATGCTGCGGCGCAGTATGCTGGCGCTATTGCTGGCGGCATTCATGCAGGGGATCGCCTTTGCCTGTCTTTATCCGA TCATTGATGCGCTGTTACGGGGGGATGCATCGTCACTTCTCAACTGGGCAGTGGCCTTCAGCATTGCCGCGATTGTGACG CTGGCGCTACGTTGGTATGGCCTGGGCTTTGAATACCGCGGCCATCTGGCGCAGGCTACCCATGAGTTACGTCTGCGCCT GGGCGAGCAATTACGCCGCGTGCCGCTGGAGAAACTCCAGCGCGGACGGGCAGGGGAAATGAACGCTTTGCTGCTGGGCA GCGTGGATGAAAACCTTAATTATGCTATTGCGATAGCCAATATTTTGTTACTCACCCTTGTTACGCCATTGACGGCGTCG CTGGCGACTTTGTGGATAGACTGGCGGCTGGGGCTGGTGATGCTACTGGTCTTCCCTCTGCTGGTGCCGTTTTATTACTG GCGCCGTCCGGCGATGCGGCGACAGATGCAGATGCTGGGGAAAGCGCATCAGCAGCTGAGCGGTGATATCGTTGAATTTG CTCAGGGGATGATGGTATTGCGTACCTGCGGTAGCGATGCCGATAAAAGCCGGGCGCTGCTGGCGCATTTCGATGCGCTG GAAAACTTACAGACCCGCACTCACCGTCAGAGCGCTGGCGCGACGATGTTGATCGCCAGCGTCGTAGAGCTGGGTCTGCA GGTGGTGGTGTTATCCGGGATCGTCTGGGTGGTGACGGGGACCCTGAACCTCGCCTTCCTGATTGCCGCCGTCGCGATGA TTATGCGCTTCGCAGAACCGATGGCGATGTTTATCAGCTACACCTCGGTCGTGGAACTGATCGCCAGCGCCCTCCAGCGG ATTGAGCAGTTTATGGCGATTGCGCCGCTTGCCGTCACAGAACAAAGCGAGCTGCCGGAACGTTACGATATCCGTTTTGA TCATGTCAGCTATCGCTACGAAGAAGGCGACGGGCAGGCACTCAACAACGTTTCTTTGACGTTCCCCGCAGCCAGTATGA GCGCGCTGGTGGGCGCCTCTGGGGCAGGCAAAACCACGGTCACAAAACTGTTAATGCGCTACGCCGATCCGCAGCAAGGA CAGATTTCTATTGGCGGCGTCGATATTCGCCGCCTGAGGCCAGAACAGCTCAATAGCCTGATTTCTGTTGTTTTCCAGGA TGTCTGGCTGTTTGATGACACGCTGCTGGCGAATATCCGTATCGCGCGCCCACAGGCGACGCAGCAGGAGGTGGAGGAAG CCGCCCGCGCGGCGCAGTGCCTTGAGTTTATTTCCCGTCTTCCGCAAGGCTGGTTGACGCCAATGGGTGAGATGGGTGGG CAGTTATCGGGCGGCGAGCGCCAGCGGATTTCCATTGCCCGAGCGTTATTGAAAAATGCGCCGGTCGTCATTCTTGATGA ACCGACCGCCGCGCTGGATATTGAAAGCGAACTGGCGGTACAGAAAGCTATCGATAACCTGGTTCACAATCGGACGGTGA TTATTATCGCCCACCGTTTATCAACCATCGCCGGAGCGGGAAACATCCTGGTGATGGAAGAGGGGCGCGTGGTTGAGCAG GGCACTCACGCGCAATTGCTCTCCCGTCATGGACGTTATCAGGCGCTGTGGCAAGCGCAAATGGCCGCGCGCGCGTGGCG CGACGAAGGGGCTTCTGCGCCTGGAGAATGGGCTCATGAGTGA Protein sequence : MEDNNPADNLAWRVIWRQLISSVGSQAGMLRRSMLALLLAAFMQGIAFACLYPIIDALLRGDASSLLNWAVAFSIAAIVT LALRWYGLGFEYRGHLAQATHELRLRLGEQLRRVPLEKLQRGRAGEMNALLLGSVDENLNYAIAIANILLLTLVTPLTAS LATLWIDWRLGLVMLLVFPLLVPFYYWRRPAMRRQMQMLGKAHQQLSGDIVEFAQGMMVLRTCGSDADKSRALLAHFDAL ENLQTRTHRQSAGATMLIASVVELGLQVVVLSGIVWVVTGTLNLAFLIAAVAMIMRFAEPMAMFISYTSVVELIASALQR IEQFMAIAPLAVTEQSELPERYDIRFDHVSYRYEEGDGQALNNVSLTFPAASMSALVGASGAGKTTVTKLLMRYADPQQG QISIGGVDIRRLRPEQLNSLISVVFQDVWLFDDTLLANIRIARPQATQQEVEEAARAAQCLEFISRLPQGWLTPMGEMGG QLSGGERQRISIARALLKNAPVVILDEPTAALDIESELAVQKAIDNLVHNRTVIIIAHRLSTIAGAGNILVMEEGRVVEQ GTHAQLLSRHGRYQALWQAQMAARAWRDEGASAPGEWAHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp7 | YP_001006812.1 | inner membrane ABC-transporter YbtQ | Not tested | HPI | Protein | 0.0 | 95 |
| irp7 | YP_002346905.1 | ABC transporter permease | Not tested | HPI | Protein | 0.0 | 95 |
| ybtQ | NP_669703.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 0.0 | 95 |
| ybtQ | NP_993010.1 | ABC transporter permease | Virulence | HPI | Protein | 0.0 | 95 |
| ybtQ | YP_070127.1 | ABC transporter permease | Virulence | HPI | Protein | 0.0 | 95 |
| ybtQ | CAA21387.1 | - | Virulence | HPI | Protein | 0.0 | 95 |
| irp7 | CAB46572.1 | inner membrane ABC-transporter, Irp7 | Virulence | HPI | Protein | 0.0 | 95 |
| APECO1_1055 | YP_853072.1 | ABC transporter | Not tested | PAI IV APEC-O1 | Protein | 0.0 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RORB6_02520 | YP_007872752.1 | Inner membrane ABC-transporter YbtQ | BAC0433 | Protein | 0.0 | 95 |
