Gene Information

Name : RORB6_02515 (RORB6_02515)
Accession : YP_007872751.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : Putative ABC iron siderophore transporter, fused permease and ATPase domains
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 596227 - 597939 bp
Length : 1713 bp
Strand : +
Note : COG1132 ABC-type multidrug transport system, ATPase and permease components

DNA sequence :
ATGGCGCTGGCGGGGCTGGCGGCATTAACCAGCCTGGGAGCGCTCCTTTTTCTGGCGTGGAGTCTGCGCGACATCCGCGC
GACGCCTGACGCGATTCCTGCCTGGCCGCTGAGTGGCCTGATTGGCTGCGTGGTATTGACTTTTGTCCTGCGCCTGCAGG
CATTCAATATCTCTCATTACGCGGCTTTTCATCTGGAGAACATTCTGCGCAGCAGGTTAGCCCGTAAAGCATTGCAGCTT
TCGCCTGGCGCGTTCCAGCAAATGGGCAGCGGATCAGTGGCGAAAGTGATGCTGGATGATGTGAAGTCGTTACATATTTT
TGTGGCTGACAGCACGCCGCTCTACGCCCGCGCGGTCATCATGCCGCTGGCGACTATCGTTATCTTGTTCTGGCTGGATT
GGCGACTGGCTATCGCGACGCTGGGGGTACTGGCGTTTGGCTCGGTTGTTCTCGTGCTCGCCCGCCAGCGTTCGGAAGAT
TTGGCCCAGCGTTATCATCAGGCGCGCGAGCAAGTCAGCGCGGCGGTTATTGAGTTCGTGCAGGCCATGCCCGTAGTGAG
AACGTTTGACAGCGGCAGCAGCAGTTTTTTGCGCTACCAACATGCCCTTGAAGAGTGGGTTGGCGTGCTCAAAACCTGGT
ATCGCAAAGCCGGTTTTTCAGCACGTTTTTCATTCTCGATTCTGAATCCTCTCCCGACCTTATTTGTCCTGATCTGGTCG
GGATACGGCCTGTTGCACTATGGCGGTTTCGACTTTATCGCGTGGGTGGCCGTTTTACTGCTCGGCAGCGGAATGGCCGA
AGCCGTGATGCCAATGATGATGCTCAATAACCTGGTCGCGCAAACGCGTTTAAGCATTCAGCGTATTTATCAGGTTCTCG
CAATGCCGGAGTTATCGCTGCCGCTATCTGACCAACAGCCGAAAGAGGCGAGTATTACCTTTGAGCAGGTGAGCTTCCAT
TATCCGCAAGCGCGGGCTGATGCCGCGTTGCAGGAGGTGAGCTTTCATGTACCTGCCGGGCAAATTGTGGCGCTGGTCGG
GCCAAGCGGCGCCGGGAAAAGCACCGTGGCACGCTTGCTGCTGCGTTACGCCGATCCCGACAAAGGCCACATCCGTATTG
GCGGCGTGGATCTTCGCGATATGCAGACGAACACCTTGATGAAGCAACTCTCTTTTGTGTTTCAGGATAACTTCCTTTTT
GCCGACACAATCGCCAATAACATTCGTCTGGGCGCGCCGGATACGCCGCTGGAGGCGGTGGTCGCGGCGGCCAGGGTGGC
GCAGGCCCATGAATTTATTAGCGCACTGCCAGAGGGGTACAACACGCGAGTCGGGGAGCGCGGGGTATTTCTCTCCGGCG
GTCAGCGACAGCGCATCACCATCGCCCGGGCGCTTTTGCAGGACCGCCCCATCCTGGTGCTCGATGAGGCGACGGCGTTT
GCTGACCCGGAAAACGAAGCCGCGCTTATCAAGGCGCTGGCGGCGGCGATGCGCGGCCGGACGGTCATCATGGTCGCGCA
TCGCCTCTCAATGGTGACTCAGGCTGATGTGATATTGCTGTTTTCCGACGGGCGGCTCAGGGAAATGGGCAACCATGCGC
AACTCCTGGAACAGGGCGGCTTGTATCAACGGCTCTGGCAACACTATCAGCAGGCGCAGCGTTGGGTACCGGGTGGCGTA
CAGGAAGAGGGAGTGGAAAATGGAAGACAATAA

Protein sequence :
MALAGLAALTSLGALLFLAWSLRDIRATPDAIPAWPLSGLIGCVVLTFVLRLQAFNISHYAAFHLENILRSRLARKALQL
SPGAFQQMGSGSVAKVMLDDVKSLHIFVADSTPLYARAVIMPLATIVILFWLDWRLAIATLGVLAFGSVVLVLARQRSED
LAQRYHQAREQVSAAVIEFVQAMPVVRTFDSGSSSFLRYQHALEEWVGVLKTWYRKAGFSARFSFSILNPLPTLFVLIWS
GYGLLHYGGFDFIAWVAVLLLGSGMAEAVMPMMMLNNLVAQTRLSIQRIYQVLAMPELSLPLSDQQPKEASITFEQVSFH
YPQARADAALQEVSFHVPAGQIVALVGPSGAGKSTVARLLLRYADPDKGHIRIGGVDLRDMQTNTLMKQLSFVFQDNFLF
ADTIANNIRLGAPDTPLEAVVAAARVAQAHEFISALPEGYNTRVGERGVFLSGGQRQRITIARALLQDRPILVLDEATAF
ADPENEAALIKALAAAMRGRTVIMVAHRLSMVTQADVILLFSDGRLREMGNHAQLLEQGGLYQRLWQHYQQAQRWVPGGV
QEEGVENGRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtP NP_669704.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 0.0 96
ybtP NP_993009.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 0.0 96
irp6 YP_001006813.1 lipoprotein inner membrane ABC-transporter Not tested HPI Protein 0.0 95
ybtP YP_070126.1 lipoprotein inner membrane ABC-transporter Virulence HPI Protein 0.0 95
ybtP YP_853073.1 inner membrane ABC-transporter Not tested PAI IV APEC-O1 Protein 0.0 95
irp6 YP_002346904.1 lipoprotein inner membrane ABC transporter Not tested HPI Protein 0.0 95
ybtP CAA21388.1 - Virulence HPI Protein 0.0 95
irp6 CAB46573.1 lipoprotein inner membrane ABC-transporter, Irp6 Virulence HPI Protein 0.0 94

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_02515 YP_007872751.1 Putative ABC iron siderophore transporter, fused permease and ATPase domains BAC0432 Protein 0.0 95