Gene Information

Name : RORB6_02485 (RORB6_02485)
Accession : YP_007872745.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : yersiniabactin siderophore biosynthetic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 575460 - 577037 bp
Length : 1578 bp
Strand : -
Note : COG1021 Peptide arylation enzymes

DNA sequence : 
ATGCATTCTTCTTTTGAATCTCTGATTAAACCGTATCCCTTCCCCATTGCCGAGCAGTTGCGCCACTGGGCGGTCCGCTA
TGCCTCGCGAATTGCCGTCGTTGATGCACAGGGTTCACTTACCTACAGCGCGCTTGATGCACGGGTCGACGAACTTGCCG
CAGGTCTGTCCTCACTGGGTTTGCACCCGGGGGAGCAGGTGATTGTGCAGCTTCCTAACGGCAACGCGTTTGTGATCCTG
CTGTTCGCCTTGTTAAGACTGGGCGTTATCCCGGTTCTGGCGATGCCCTCCCAACGGGCGCTGGATATCGACGCGCTGAT
GGCGCTGGCGCAACCCGTCGCTTACGTTATTCACGGGGAAAACCACGCAGAGCTGGCCCGCCAGATGGCGCATAAACACG
CCTGCTTACGTCATGTTCTGGTTGTAGAAGAGCGCGCAGGCGACGATTTTACGCCTCTCTTCTCGCTGCGCGGTGAACGG
CAGGAGTGGCCGCAGCCTGAAGTTTCCGCCACCGCGCTGCTGCTGCTCTCAGGCGGCACAACCGGGACGCCAAAGCTTAT
CCCGCGCCGGCATGCCGACTATAGCTATAACTTCAGCGCGTCTGCCGAACTGTGCGGCATCAGTCAACAGAGCGTGTATC
TCGCCGTCCTCCCCGTGGCGCATAACTTTCCGCTAGCCTGCCCCGGCATTCTGGGAACGCTGGCCTGCGGCGGAAAAGTG
GTGCTGACCGACAGCCCCAGTTGCGATGAGGTGATGCCCTTAATCGCTAATGAAGGAGTCACCCACGTTGCTCTGGTTCC
GGCGCTGGCGCAATTGTGGATCCAGGCCAGAGAGTGGGAAGAGAGCGATCTCTCCTCTCTGCGCGTCATTCAGGTGGGCG
GCGCCCGGCTCGACCCGACGCTTGCTGAGCAGGTTATCGCCACCTTTGACTGCACCTTGCAACAGGTCTTCGGTATGGCG
GAAGGGCTGCTCTGTTTTACCCGGCTGGACGATCCGCGAACCACCGTTCTCCACAGCCAGGGACGTCCGTTGTCTCCCGA
GGATCAAATCCGAATCGTTGATGAAAACGAGAACGACGTCGCCCCGGGCGAAATCGGGCAGTTGTTAACACGCGGCCCTT
ACACCATTTCGGGCTATTACCGCGCTCCTGCTCACAACGCGCACGCCTTTAATGCGCAGGGGTTTTACCGCACTGGTGAC
AATGTCAGGCTGGATGAGGCGGGAAACCTGTGCGTTGAGGGGCGCCTAAAAGAGCAGATCAATCGTGCCGGAGAAAAAAT
CGCCGCGGCGGAAGTCGAATCGGCATTGATGCGTTTAGAAGAGGTGAAGGATTGCGCCGTGGTCGCCGCGCCGGACACGC
TACTTGGCGAGCGGATTTGCGCATTTATCATCGCGCAACAAACACCATCTGACTATCAGCAGCTACGTCAACAGTTGACC
AGTATGGGGCTCAGCGCGTGGAAAATCCCTGACCAAATCGAGTTCCTGAACCACTGGCCGCTCACCGCCGTCGGCAAGAT
AGACAAAAAGCGCCTGACGGCTCTCGCCATCGACCGCTATCACCCTTCTGCCCAATAA

Protein sequence : 
MHSSFESLIKPYPFPIAEQLRHWAVRYASRIAVVDAQGSLTYSALDARVDELAAGLSSLGLHPGEQVIVQLPNGNAFVIL
LFALLRLGVIPVLAMPSQRALDIDALMALAQPVAYVIHGENHAELARQMAHKHACLRHVLVVEERAGDDFTPLFSLRGER
QEWPQPEVSATALLLLSGGTTGTPKLIPRRHADYSYNFSASAELCGISQQSVYLAVLPVAHNFPLACPGILGTLACGGKV
VLTDSPSCDEVMPLIANEGVTHVALVPALAQLWIQAREWEESDLSSLRVIQVGGARLDPTLAEQVIATFDCTLQQVFGMA
EGLLCFTRLDDPRTTVLHSQGRPLSPEDQIRIVDENENDVAPGEIGQLLTRGPYTISGYYRAPAHNAHAFNAQGFYRTGD
NVRLDEAGNLCVEGRLKEQINRAGEKIAAAEVESALMRLEEVKDCAVVAAPDTLLGERICAFIIAQQTPSDYQQLRQQLT
SMGLSAWKIPDQIEFLNHWPLTAVGKIDKKRLTALAIDRYHPSAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 0.0 91
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 0.0 91
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 0.0 91
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 0.0 91
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 0.0 91
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 0.0 91
ybtE CAA21394.1 - Virulence HPI Protein 0.0 91
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 0.0 91
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 0.0 91
irp2E YP_005163485.1 siderophore biosynthetic protein Virulence Not named Protein 2e-77 41
irp2E YP_005134497.1 siderophore biosynthetic protein Virulence Not named Protein 2e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_02485 YP_007872745.1 yersiniabactin siderophore biosynthetic protein VFG0168 Protein 2e-109 51
RORB6_02485 YP_007872745.1 yersiniabactin siderophore biosynthetic protein VFG1817 Protein 4e-92 45
RORB6_02485 YP_007872745.1 yersiniabactin siderophore biosynthetic protein VFG0932 Protein 2e-85 43