Gene Information

Name : RORB6_24510 (RORB6_24510)
Accession : YP_007877134.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5364388 - 5365608 bp
Length : 1221 bp
Strand : -
Note : COG0582 Integrase

DNA sequence : 
ATGGCGCGCATTACACGCCCACTGACTAACAACGAAATACTTAAAGCTAAACCTCGTGAAAAAGACTTTACCCTGCATGA
TGGTGATGGCCTGTTCTTGCTCGTCAAAACCTCCGGTAAAAAACTCTGGCGCTTCCGTTATCAGCGACCGGGAAGCAGCA
GCCGCACAAATTTGAGTCTCGGCTCATACCCTGCCCTTACACTCGCAGCAGCTCGTCAGATACGCGACCAGCACTTAACC
ACGCTCGCGCAAGGCATGGATCCACAACAGCAGCAGGAGCAAGCGTCAGAACAACGCCAGATTGAGTTAGACAGCATTTT
CTCAACAGTGGCTGCTAACTGGTTCCAGATTAAAAGCAGAAGCGTCACAGAAGATTATGCAAAAGACATTTGGCGCTCCT
TGGATAAAGATGTTTTCCCTGCCATTGGGGCGATACCTGTCCAGGAGATTAAAGCCAGAACGATTGTTGAAGCACTAGAG
CCAATCAAAGCTCGGGGGGCGCTTGAGACTGTTCGTCGTTTGGTACAGCGTGTTAACGAGATAATGATTTATGCGGTTAA
CACCGGTCTGATAGATGCGAATCCGGCATCAGGTGTTGGCATGGCCTTTGAGAAACCCAAAAAGAAAAACATGCCGACGC
TGCAACCAGAAGAGTTGCCGAGGCTAATGCGTTCTCTGGTGATGTCGAATCTCTCTGTTGCGACTCGCTGTCTCATTGAA
TGGCAACTCCTTACGCTTGTGCGCCCTTCTGAGGCCTCAGGTACTAGTTGGGCAGAGATCGATCTCGATGCCAAGCTCTG
GACTATTCCAGCCGAACGGATGAAAGCAAAGCGGGAACATATTGTTCCTTTATCACCACAGGCATTAGAGATTCTGGATG
TGATGAAGCCAATCAGCGCTCATAGGGAACATGTTTTCCCGAGCAGGAATGATCCTAAGCAACCTATGAATAGTCAGACT
GCTAATGCTGCACTGAAGAGAATTGGTTATGGTGGGAAGCTTGTTGCGCATGGTTTGCGTTCTATAGCTAGTACAGCAAT
GAATGAAGCTGGCTTAAACCCTGATGTTATTGAAGCAGCTCTTGCACACAGTGATCGCAATGAAGTAAGAAAAGCTTACA
ATCGAACAACATATTTATCTCAGCGAAAAGACCTCATGCTCTGGTGGGGGAATTTCATTTACTTAAATTCTACATTATAT
TTAAAAAAGGAATCAGCATGA

Protein sequence : 
MARITRPLTNNEILKAKPREKDFTLHDGDGLFLLVKTSGKKLWRFRYQRPGSSSRTNLSLGSYPALTLAAARQIRDQHLT
TLAQGMDPQQQQEQASEQRQIELDSIFSTVAANWFQIKSRSVTEDYAKDIWRSLDKDVFPAIGAIPVQEIKARTIVEALE
PIKARGALETVRRLVQRVNEIMIYAVNTGLIDANPASGVGMAFEKPKKKNMPTLQPEELPRLMRSLVMSNLSVATRCLIE
WQLLTLVRPSEASGTSWAEIDLDAKLWTIPAERMKAKREHIVPLSPQALEILDVMKPISAHREHVFPSRNDPKQPMNSQT
ANAALKRIGYGGKLVAHGLRSIASTAMNEAGLNPDVIEAALAHSDRNEVRKAYNRTTYLSQRKDLMLWWGNFIYLNSTLY
LKKESA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-103 53
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-103 53
int AAK20773.1 integrase Not tested VPI Protein 1e-103 53
int AAK20803.1 integrase Not tested VPI Protein 1e-103 53
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-103 53
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-99 49
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 8e-91 49
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-90 49
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-90 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_24510 YP_007877134.1 hypothetical protein VFG1092 Protein 7e-91 49