Gene Information

Name : RORB6_24270 (RORB6_24270)
Accession : YP_007877086.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : chaperone protein fimC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5313778 - 5314509 bp
Length : 732 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGCATTTACTGGATAGTTTCTTTTTTATTCGTTGTTTTCCAGACGCTTATCTGATGGTTGTGATTATGAAAAACATGCT
GGCCGGTATCGCGGCTGCCTTTTTATTGTTAGCCGCTGCGGCCCAGGCCGGTATTATTATGGGCGGCACCCGGGTTATAT
ATCAGGAAGGAAAACGTGAAGCCTCTATTTCAGTGAGCAATGCGGATCCGCATTCCCCCTATCTGGTGCAGTCGTGGGTA
GAAAACTATGTGGAAAAAGAGCAGGGACCAGTCCCTTTTATTGTCACGCCGCCGCTGTTTCGTCTCGACCCGGATCAAGA
AAACGTATTGCGAATTAATTTCATTGGCGCCGATCTTCCTCGCGATCGCGAATCCGTTTATTGGCTGAATGTAAAAAGCA
TAGCCCCGACGCAAAAAGGGGATGTGAATAAACTCCAGGTCAATATTAAATCTAAATTCAAGATTTTTTATCGACCGAAT
AGCCTTGCCGGGGATCCGATGAAAGCCTGGCAGCAATTAACCTTTAAAGTGGAGGGTAATCGACTGGTGGCGCACAACCC
AACGCCCTATTTTGTCTCCTTTTTCTCCCTCTCGGTGGGCGGTAAAGAGATAGATGAACCCGGCATGATTGGACCGTTAA
CCCGCAAAGAGTGGCCGGTTAACGGTGCAGGAACGATTAGGTGGCGCGCCATTAATGATTTTGGCGGTATTACGGATAGC
GCGCAGCAGTAA

Protein sequence : 
MHLLDSFFFIRCFPDAYLMVVIMKNMLAGIAAAFLLLAAAAQAGIIMGGTRVIYQEGKREASISVSNADPHSPYLVQSWV
ENYVEKEQGPVPFIVTPPLFRLDPDQENVLRINFIGADLPRDRESVYWLNVKSIAPTQKGDVNKLQVNIKSKFKIFYRPN
SLAGDPMKAWQQLTFKVEGNRLVAHNPTPYFVSFFSLSVGGKEIDEPGMIGPLTRKEWPVNGAGTIRWRAINDFGGITDS
AQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 6e-22 41
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 6e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_24270 YP_007877086.1 chaperone protein fimC VFG0007 Protein 6e-31 41