Gene Information

Name : RORB6_24260 (RORB6_24260)
Accession : YP_007877084.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5310871 - 5312391 bp
Length : 1521 bp
Strand : +
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence : 
ATGCGTTATGCACATCCTGGCACCCCGGGCGCCTTAGTTTCATTCAAGTCCGCATACGGTAACTATATTGACGGTCAATT
TGTCGAACCGCTCGGCGGCGAATACTTTATGAATACCTCCCCCGTGGACGGGAGTGACATTGCACAATTTCCCCGCTCCG
ATGCCAAAGATATCGATTTTGCTCTTGATGCCGCACACCGCGCCGCGGAAGCCTGGGGGAAAACATCGGTACAGCATCGT
TCCAACCTGCTGCTTCAGGTCGCCGATCGGATTCAGGAGAACCTGGAATATCTGGCGATTGCTGAAAGCTGGGACAATGG
TAAACCGGTGCGCGAAACGCTGAATGCCGATCTGCCGTTGGCGGTCGATCACTTCCGCTATTTTGCCGGCTGTCTGCGGG
CACAGGAGGGGAGTACTGCGGAAATTGATGAAACCACCGTGGCCTATCACTTCCATGAACCGCTGGGCGTAGTCGGGCAA
ATTATTCCGTGGAACTTTCCGCTGCTGATGGCGGCCTGGAAGCTGGCGCCGGCGCTGGCGGCCGGGAACTGTGTGGTGCT
CAAGCCGGCAGAGCAGACGCCGCTGAGCATCACGCTGCTGCTGGAAATTATTGGCGACCTCTTCCCGCCGGGCGTCCTGA
ACGTGGTGCAGGGCTTCGGTAAAGAGGCCGGTGAAGCGCTGGCAACCAGCAAGCGTATTGCCAAAATTGCCTTTACCGGC
TCAACGCCCGTCGGACGGCATATTCTGGCCTGCGCGGCGGAGAACATTATTCCCGCCACCGTTGAGCTGGGCGGCAAGTC
GCCAAATATCTATTTTGCCGATGTGATGGACGGAGAAGAAGAGTTTATCGAGAAGGCGGTGGAGGGGCTGGTGCTGGGCT
TCTTCAACCAGGGCGAAGTATGTACCTGCCCATCGCGCGCCCTGATCCATGAATCCATCTACGAGCCGTTTATGGAGCGA
GTGATGGCGAAGGTGGCCCAGATTCGCCGCGGCGATCCCTTTGATACCGACACCATGATCGGGGCACAGGCGTCACGCCA
GCAGTTCGATAAGATCCTGTCGTACATTAAGATTGCCCGCGAAGAGGGGGGGCAGATCCTGACCGGCGGAGAACGCGCCA
GTATTACGGCTGAACTGGATAATGGTTACTACATTCAGCCAACTCTGATTAAGGGGCGCAATGATATGCGCAGCTTCCAG
GAAGAGATTTTTGGCCCGGTCATCGGCGTCACGACCTTCAAAGATGAGGCAGAAGCGCTGGAAATAGCCAACCAGACTCA
GTTTGGGCTCGGCGCCGGCGTCTGGACCCGCGACAGCAATCTGGCGTACCGAATGGGGCGTGGGATTAAAGCCGGTCGTG
TCTGGACCAACTGTTATCACGTCTACCCGGCCCATGCCGCGTTTGGCGGCTATAAACAGTCAGGCGTCGGTCGTGAAACT
CATAAAATGGCCCTTGATGCTTATCAACAGACGAAAAACCTGCTGGTGAGCTACGGTACCGCGCCGTTAGGACTGTTTTA
A

Protein sequence : 
MRYAHPGTPGALVSFKSAYGNYIDGQFVEPLGGEYFMNTSPVDGSDIAQFPRSDAKDIDFALDAAHRAAEAWGKTSVQHR
SNLLLQVADRIQENLEYLAIAESWDNGKPVRETLNADLPLAVDHFRYFAGCLRAQEGSTAEIDETTVAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSITLLLEIIGDLFPPGVLNVVQGFGKEAGEALATSKRIAKIAFTG
STPVGRHILACAAENIIPATVELGGKSPNIYFADVMDGEEEFIEKAVEGLVLGFFNQGEVCTCPSRALIHESIYEPFMER
VMAKVAQIRRGDPFDTDTMIGAQASRQQFDKILSYIKIAREEGGQILTGGERASITAELDNGYYIQPTLIKGRNDMRSFQ
EEIFGPVIGVTTFKDEAEALEIANQTQFGLGAGVWTRDSNLAYRMGRGIKAGRVWTNCYHVYPAHAAFGGYKQSGVGRET
HKMALDAYQQTKNLLVSYGTAPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-154 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-161 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-161 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-161 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-160 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_24260 YP_007877084.1 aldehyde dehydrogenase VFG0082 Protein 1e-154 65