Gene Information

Name : RORB6_23885 (RORB6_23885)
Accession : YP_007877009.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : manganese/iron transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5236647 - 5237468 bp
Length : 822 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGAACGCCGATATGCCTGGTCTCGCGGTCAACCGGGTCAGCGTAACCTATCGCAACGGCCACACCGCGCTGCGCGATGC
CACCTTCAGCGTACCGCGCGGCTCAATTGCCGCGCTGGTGGGCATCAACGGTTCGGGAAAATCGACGCTGTTTAAAGCGC
TGATGGGCTTTGTTCGTCTGTCCCATGGCGAGATTGCCATACTTGGCCAGCCGGTTCATCGCGCGCTGCGCCAGAACCTG
GTGGCCTATGTCCCGCAATCAGAGGACGTTGACTGGACCTTCCCGGTGCTGGTGGAGGATGTCGTCATGATGGGCCGCTA
CGGGCATATGGGCTGGCTGCGACGGGCCAAAGCCCATGATCGGGAAGTGGTTGATGCGGCGCTGGCCCGCGTCGGGATGA
GCGACTATCGCCACCGGCAAATCGGCGAGCTGTCCGGCGGGCAGAAAAAACGGGTGTTCCTTGCCCGCGCTATCGCCCAG
CAGGGCAAGGTCATTCTGCTGGATGAGCCGTTTACCGGCGTTGACGTCCAGACCGAAACCCAGATCATCACCCTGCTGCG
CGAACTGCGCGACGACGGCTGTACTCTGCTGGTTTCGACCCACAATCTCGGTTCGGTCAGCGAGTTTTGCGATTACACGG
TGATGGTCAAAGGTACCGTGCTGGCCAGTGGACCGACGGAAACGACCTTTACCGCCGCCAATCTCGAACTCGCTTTCAGC
GGCGCGCTGCGCCACGTGGTGCTCAGCGGCGGAGAAGAGCAGATTATCACCGACGATGAACGGCCGTTTATCAGCCGCCG
GACGGCGGGAGGTGAAGGATGA

Protein sequence : 
MNADMPGLAVNRVSVTYRNGHTALRDATFSVPRGSIAALVGINGSGKSTLFKALMGFVRLSHGEIAILGQPVHRALRQNL
VAYVPQSEDVDWTFPVLVEDVVMMGRYGHMGWLRRAKAHDREVVDAALARVGMSDYRHRQIGELSGGQKKRVFLARAIAQ
QGKVILLDEPFTGVDVQTETQIITLLRELRDDGCTLLVSTHNLGSVSEFCDYTVMVKGTVLASGPTETTFTAANLELAFS
GALRHVVLSGGEEQIITDDERPFISRRTAGGEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-108 82
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-108 82
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-108 82
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-108 82
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-108 82

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_23885 YP_007877009.1 manganese/iron transporter ATP-binding protein BAC0350 Protein 2e-108 82
RORB6_23885 YP_007877009.1 manganese/iron transporter ATP-binding protein BAC0440 Protein 6e-79 62
RORB6_23885 YP_007877009.1 manganese/iron transporter ATP-binding protein BAC0400 Protein 1e-47 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_23885 YP_007877009.1 manganese/iron transporter ATP-binding protein VFG0526 Protein 2e-108 82