Gene Information

Name : RORB6_23810 (RORB6_23810)
Accession : YP_007876994.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5218647 - 5221208 bp
Length : 2562 bp
Strand : -
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence :
ATGAGTACAATAGAAAATTTAGACTCTCACACCCCCATGATGCAGCAGTACCTGAAGCTGAAGGCTCAGCATCCGGAGAT
CCTGCTGTTCTATCGTATGGGCGACTTTTATGAGCTGTTTTATGATGATGCCAAACGGGCCTCTCAGCTGCTCGATATCT
CGCTGACCAAACGCGGCGCCTCGGCGGGTGAGCCCATTCCTATGGCCGGGATCCCGCACCATGCGGTGGAAAACTATCTC
GCCAAACTGGTCAACCAGGGTGAATCGGTGGCCATTTGCGAACAGATTGGCGACCCGGCCACCACCAAAGGTCCGGTCGA
GCGTAAAGTGGTGCGTATCGTCACGCCTGGCACTATCAGCGATGAAGCGCTGCTGCAGGAACGTCAGGATAACCTGCTGG
CCGCTATCTGGCAGGACAGCAAAGGCTTTGGCTATGCGACGCTGGATATCAGCTCCGGTCGTTTCCGCCTGAGCGAACCG
GCCGACCGCGAAACCATGGCCGCCGAGCTGCAGCGTACCAACCCGGCTGAACTGCTGTATGCCGAAGATTTTGCCGAATC
GGCGTTGATTGAAGGCCGCCGCGGCCTGCGCCGTCGTCCGCTGTGGGAGTTTGAAATCGACACCGCGCGCCAGCAGCTGA
ATTTACAGTTTGGCACCCGCGACCTGGTCGGTTTCGGCGTCGAAAATGCGCCGCGCGGTCTCTGTGCCGCCGGCTGCCTG
TTGCAATATGTCAAAGATACCCAGCGCACCTCCCTGCCGCATATTCGCTCCATCACCATGGAGCGCCAGCAGGACAGTAT
TATTATGGACGCGGCAACCCGCCGTAACCTTGAGATTACCCAGAATCTGGCCGGTGGTTTCGACAATACCCTGGCGTCGG
TGCTCGACTGCACCGTGACGCCGATGGGCAGCCGGATGCTCAAACGCTGGCTGCATATGCCGGTACGCGACACGGCGGTG
CTGGTCGAACGCCAGCAAACCATAGGCGCGCTGCAGGAGCGTTATACCGAACTGCAGCCGGTGCTACGTCAGGTGGGCGA
TCTGGAACGTATTCTGGCGCGACTGGCGCTGCGCACCGCGCGTCCGCGCGACCTCGCCCGCATGCGTCATGCGTTCCAGC
AGCTGCCGATCCTGCGCGAGATGCTGGCTGACGTCAGCTGCGCGCCGGTCCAGCGGCTGCGCGATAAAATGGGCGAGTTC
AGCGAACTGCGCGAACTGCTCGAACGCGCAATTATCGACGCGCCGCCGGTGCTGGTGCGCGACGGCGGCGTTATTGCCCC
GGGCTACCATGAGGAGCTCGATGAATGGCGCGCGCTGGCGGATGGCGCCACCGACTATCTCGATAAGCTGGAAATTCGCG
AACGCGAACGCCTGGGGCTGGACACGCTGAAGGTCGGTTACAATGCCGTGCACGGTTACTACATTCAGATCAGCCGCGGC
CAGAGCCAACATGCCCCGATTCACTACGTCCGCCGCCAGACGCTGAAAAACGCCGAGCGCTACATTATTCCGGAACTGAA
GGAGTATGAGGACAAAGTACTGACGTCGAAAGGGAAAGCGCTGGCGCTGGAGAAACAGCTCTACGAGCAGCTGTTCGATA
TGCTGCTGCCGCACCTTGCCGACCTTCAGCAAAGCGCCAGCGCGCTGGCGGAACTGGATGTACTGGTTAACCTCGCCGAA
CGCGCGGAAACCCTGAACTACTGCTGCCCGACCTTCAGCGACAAACCGGGTATTCGCATCAGCGAAGGCCGTCACCCGGT
GGTCGAACAGGTGCTGAAGGAGCCGTTCATCGCCAACCCGCTGAGCCTGGCGCCGCAGCGCCGGATGCTGATTATTACCG
GCCCGAATATGGGCGGTAAAAGTACCTATATGCGGCAGACCGCGCTGATTGCGCTGCTGGCCTATATCGGCAGCTACGTC
CCGGCGGAGAAAGTTGAAATCGGCCCTATCGATCGCATCTTTACCCGCGTCGGCGCGGCAGATGACCTGGCAAGCGGCCG
TTCCACCTTCATGGTAGAAATGACCGAAACCGCCAATATTCTGCATAATGCCACCGAACACAGCCTGGTGCTGATGGATG
AAATCGGCCGCGGGACCTCCACCTACGACGGTCTGTCGCTGGCGTGGGCCTGCGCCGAAAGTCTGGCCAATAAGATTAAG
GCGCTGACCCTTTTTGCCACCCACTACTTCGAACTGACCCAGCTGCCGGAGAAAATGGAAGGCGTGGCGAACGTCCATCT
TGATGCGCTGGAACATGGCGATACCATCGCCTTCATGCACAGCGTCCAGGATGGCGCCGCCAGCAAAAGCTACGGTCTGG
CGGTTGCCGCACTGGCGGGCGTGCCTAAAGAGGTGATTAAGCGCGCGCGGCAGAAATTACGCGAGCTGGAGAGTATTGCC
CCAGGCGTCGCCGCCACGCAGGTCGATGGTACGCAGATGTCGCTGCTCTCCGCCCCGGAAGAGACCTCGCCGGCGGTAGA
AGCGCTGGAAAATCTCGACCCGGATTCTCTGACCCCGCGTCAGGCGCTGGAGTGGATTTACCGGCTGAAGAGCCTGGTGT
AA

Protein sequence :
MSTIENLDSHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPHHAVENYL
AKLVNQGESVAICEQIGDPATTKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP
ADRETMAAELQRTNPAELLYAEDFAESALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCL
LQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGFDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAV
LVERQQTIGALQERYTELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPILREMLADVSCAPVQRLRDKMGEF
SELRELLERAIIDAPPVLVRDGGVIAPGYHEELDEWRALADGATDYLDKLEIRERERLGLDTLKVGYNAVHGYYIQISRG
QSQHAPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEQLFDMLLPHLADLQQSASALAELDVLVNLAE
RAETLNYCCPTFSDKPGIRISEGRHPVVEQVLKEPFIANPLSLAPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYV
PAEKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAESLANKIK
ALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESIA
PGVAATQVDGTQMSLLSAPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_23810 YP_007876994.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 94