Gene Information

Name : RORB6_23040 (RORB6_23040)
Accession : YP_007876840.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : type I fimbrial chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5044037 - 5044723 bp
Length : 687 bp
Strand : -
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGACACGCTGCTTACTGGCGGGCTTATTGATGATAACGACCGCCGGTTTCGCTGCGCGTGCCGAAGCGGGCGTGGCGCT
GGGAGCCACCCGCGTTATTTATCCCGCCGGACAAAAGCAGGTTCAGCTGGCGGTGACCAACAATGACGACAACAGCACCT
ATCTGATTCAGTCGTGGGTCGAAAACGCCGACGGACAAAAAGACGGGCGCTTTGTGATCACCCCACCGCTGTTCGCTATG
CAGGGCAAAAAAGAGAATACGCTGCGCATAATCGATGCGACCAACGACAAGCTGCCGCAGGATCGGGAAAGTTTGTTCTG
GATGAACGTGAAAGCCATCCCCTCCATGGATAAATCAAAGCTTAGCGATAACACGCTGCAGCTGGCGATTATCAGCCGCA
TCAAGCTCTATTACCGCCCGGGGAAACTCGCGCTGTCGCCGGATCAGGCGGCAGAGAAGCTGACATTTCGCCGTAGCGCC
AACACGTTGACGCTGATCAATCCCACGCCCTACTACCTGACGGTGACCGAACTCAATGCCGGCACCCGGGTGCTGGAAAA
TGCGCTGGTTCCGCCGATGGGGGAAGCCTCGGTAAAAATCCCGTCCGACGCCGGACGCGACATCACCTACCGGACGATTA
ACGACTACGGCGCACTGACCCCACGGATGAAGGGCGCACTGCAATAA

Protein sequence : 
MTRCLLAGLLMITTAGFAARAEAGVALGATRVIYPAGQKQVQLAVTNNDDNSTYLIQSWVENADGQKDGRFVITPPLFAM
QGKKENTLRIIDATNDKLPQDRESLFWMNVKAIPSMDKSKLSDNTLQLAIISRIKLYYRPGKLALSPDQAAEKLTFRRSA
NTLTLINPTPYYLTVTELNAGTRVLENALVPPMGEASVKIPSDAGRDITYRTINDYGALTPRMKGALQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-80 85
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 8e-67 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_23040 YP_007876840.1 type I fimbrial chaperone VFG0875 Protein 3e-86 86
RORB6_23040 YP_007876840.1 type I fimbrial chaperone VFG0911 Protein 3e-67 70
RORB6_23040 YP_007876840.1 type I fimbrial chaperone VFG1644 Protein 5e-67 69
RORB6_23040 YP_007876840.1 type I fimbrial chaperone VFG0445 Protein 3e-49 48