|
Name : lysS (RORB6_22910) Accession : YP_007876814.1 Strain : Raoultella ornithinolytica B6 Genome accession: NC_021066 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 5016190 - 5017707 bp Length : 1518 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGTCTGAACAACAAGCACAGGGCGCTGACGCGGCAATTGACCTTAATAATGAACTGAAAGCCCGTCGTGAAAAGCTGGC TCAGCTTCGTGAGCAGGGTATCCCGTTCCCGAACGATTTCCGTCGTGACCATACCTCTGACCAACTGCACGCTGACTTCG ATGCGAAAGAAAACGAAGAGCTGGAAGCACTGAACGTTGAAGTCTCCGTTGCTGGTCGTATGATGACCCGCCGTATTATG GGTAAAGCCTCTTTCGTCACTCTGCAGGATGTCGGCGGCCGCATTCAGCTGTACGTCGCGCGTGACGATCTGCCGGAAGG CGTCTACAACGAGCAGTTCAAAAAATGGGACCTCGGCGATATCATCGCGGCGCGCGGTAAGCTGTTTAAAACCAAAACCG GCGAGCTGTCTATCCACTGCACCGAACTGCGTCTGCTGACCAAAGCCCTGCGCCCGCTGCCGGACAAATTCCACGGCCTG CAGGATCAGGAAGCGCGCTACCGTCAGCGCTACCTGGATCTGATCTCCAACGACGAATCCCGCAAGACCTTTAAGGTTCG CTCCCAGATTCTGGCCGGTATCCGCCAGTTCATGGTCGGTCGCGGCTTTATGGAAGTCGAAACCCCGATGATGCAGGTGA TCCCTGGCGGCGCGTCTGCCCGTCCGTTCATCACCCATCACAACGCGCTGGATATGGACATGTACCTGCGTATCGCGCCG GAACTGTATCTGAAGCGTCTGGTTGTGGGCGGCTTCGAACGCGTATTCGAAATCAACCGTAACTTCCGTAACGAAGGCAT CTCCGTGCGTCATAACCCAGAGTTCACCATGATGGAACTCTATATGGCGTACGCGGACTATAAAGATCTGATCGAGCTCA CCGAATCCCTGTTCCGTACCCTGGCGCAGGATATTCTGGGCAACACCGCGGTTCCTTATGGCGATCAGACCTTCGACTTC GGTAAGCCGTTTGAAAAACTGACCATGCGTGAAGCTATCAAGAAATATCGTCCGGAAACCGAGATGGCGGATCTGGATAA CTTCGATTCCGCAAAAGCGATTGCAGAGTCTATCGGCATTCACGTTGAGAAGAGCTGGGGTCTGGGCCGTATCGTGACGG AGATCTTTGAAGAAGTGGCGGAAGCGCACCTGATTCAGCCGACCTTTATCACCGAATACCCGGCGGAAGTCTCTCCGCTG GCGCGTCGTAATGACCAGAACCCGGAAATTACCGACCGCTTTGAGTTCTTTATCGGCGGCCGTGAAATCGGTAACGGCTT CAGCGAGCTCAACGACGCGGAAGATCAGGCGCAGCGCTTCCAGGACCAGGTGAATGCGAAAGCCGCTGGTGACGATGAAG CTATGTTCTACGATGAAGACTACGTGACCGCGCTGGAACACGGCCTGCCGCCGACCGCCGGTCTGGGTATCGGTATTGAC CGTATGGTGATGCTGTTTACCAACAGCCATACCATCCGCGACGTCATCCTGTTCCCGGCAATGCGCCCGGTTAAATAA Protein sequence : MSEQQAQGADAAIDLNNELKARREKLAQLREQGIPFPNDFRRDHTSDQLHADFDAKENEELEALNVEVSVAGRMMTRRIM GKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDIIAARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL QDQEARYRQRYLDLISNDESRKTFKVRSQILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDMDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNTAVPYGDQTFDF GKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPL ARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFQDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-168 | 69 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 6e-92 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007876814.1 | lysyl-tRNA ligase | VFG1668 | Protein | 2e-168 | 69 |
