Gene Information

Name : xerD (RORB6_22890)
Accession : YP_007876810.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5011588 - 5012484 bp
Length : 897 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
GTGAAAGAGGATCTCGCACGAATCGAACAGTTTCTTGATGCCTTGTGGCTGGAGCGCAATCTGGCGGAAAATACGCTGAG
CGCCTACCGTCGGGATCTGACGATGGTAGTGGAATGGCTGCATCATCGCGAGTTATCGCTGGTTAGCGCCAGCGGCGAGG
ATCTTCAGGCGCTGCTGGCCGAGAGACAAACGGGCGGCTATAAAGCCACCAGTACCGCGCGGCTGTTGAGCGCCGTGCGC
CGTTTCTTCCAGCACCTCTATCGGGAGAAAATTCGTCCGGATGACCCCAGCGCGCTGCTGGCGTCACCGAAACTGCCGCA
GCGGCTGCCGAAAGATCTGAGTGAGGCTCAGGTCGAACGTCTGCTGCAGGCGCCGCTGGTCGAGCAGCCTCTGGAACTCC
GCGATAAAGCGATGCTTGAGGTGCTGTACGCGACCGGCCTGCGCGTGTCGGAACTGGTGGGCCTGACGATGAGCGACATC
AGCCTGCGTCAGGGCGTCCTGCGGGTGGTGGGTAAAGGGAACAAAGAACGGCTGGTCCCGCTTGGCGAAGAGGCGGTGCT
GTGGGTTGAGAACTACCTGGAGTACGGGCGCCCCTGGCTGCTGAACGGCGTGGCATCTGATGTGCTTTTTCCAAGTCAGC
GCGCGCAGCAAATGACGCGCCAGACCTTCTGGCATCGGATTAAGCACTATGCCGTGCTGGCCGGAATAGATAGCGCGAAG
CTCTCCCCGCACGTTTTACGCCATGCGTTTGCCACGCATTTACTTAACCATGGCGCAGATTTACGCGTGGTACAGATGCT
GTTGGGACACAGCGATCTCTCAACGACGCAGATCTACACCCATGTCGCGACCGAGCGTCTGAGACAACTTCATCAACAGC
ACCACCCGCGGGCGTGA

Protein sequence :
MKEDLARIEQFLDALWLERNLAENTLSAYRRDLTMVVEWLHHRELSLVSASGEDLQALLAERQTGGYKATSTARLLSAVR
RFFQHLYREKIRPDDPSALLASPKLPQRLPKDLSEAQVERLLQAPLVEQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
SLRQGVLRVVGKGNKERLVPLGEEAVLWVENYLEYGRPWLLNGVASDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSAK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-63 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-63 54