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Name : RORB6_22395 (RORB6_22395) Accession : YP_007876711.1 Strain : Raoultella ornithinolytica B6 Genome accession: NC_021066 Putative virulence/resistance : Virulence Product : pili chaperone protein Function : - COG functional category : - COG ID : - EC number : - Position : 4915896 - 4916648 bp Length : 753 bp Strand : + Note : COG3121 P pilus assembly protein, chaperone PapD DNA sequence : ATGATGATACGTTTTTCCGCCCTGGTGGGCATACCACTGATGATCTCCTGTATGGTGCAGCAAGCGAGCGCTGCCGTATC GCTGGACAGAACCAGGGTCATTTTTGACGGCGCGGCAAAGTCGGTCAGCTTGCGTCTCACTAACGAGAACAAGACGCTGC CGTATCTGGCCCAAGGATGGGTGGAAGATCCGCAGGGGAAAAAGATAACGGACCCATTGGTGCTGCTGCCGCCAGTACAA CGAATCGAGCCGGGGGAACAAAGCCAGATCAAAGTGCAATCTACCGCCTCGATTCAGCGTTTGCCGCAGGATCGGGAGTC GCTGTTCTATTTCAACCTGCGCGAGATCCCGCCCAAAAGCAGCAAACCCAATACCCTGCAGCTGGCGTTACAGACCCGCA TCAAGCTCTTCTATCGTCCGCCGGCTATCGAGGTGAAACGCGCGGATTACGCTACGCCATTTCAGGAACAGCTGACTCTG ACACGTGAGGGCGACAAGTATCGGGTTAATAACCCGACACCGTATTATATCTCGCTGGTCAACGCCTCCTCAACGCTCGC CGGCAAAGCGGCTGCCGGGTTCAAGCCCATTATGGTGGAGCCGAAAGGGCAACTGACGCTCGTGCCGACCGCTTCGGCGT TGGGTAGCGTGCCGGTACTGACCTATGTCAACGACTTTGGCGGGCGCGCGAAGCTGGTCTTCAGCTGCGGCGGCAGTCAG TGCAAGGCCGTCCCGCAGGAAAAGAAAAAGTAA Protein sequence : MMIRFSALVGIPLMISCMVQQASAAVSLDRTRVIFDGAAKSVSLRLTNENKTLPYLAQGWVEDPQGKKITDPLVLLPPVQ RIEPGEQSQIKVQSTASIQRLPQDRESLFYFNLREIPPKSSKPNTLQLALQTRIKLFYRPPAIEVKRADYATPFQEQLTL TREGDKYRVNNPTPYYISLVNASSTLAGKAAAGFKPIMVEPKGQLTLVPTASALGSVPVLTYVNDFGGRAKLVFSCGGSQ CKAVPQEKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 8e-58 | 51 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 7e-57 | 48 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 8e-57 | 48 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 1e-56 | 48 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 1e-56 | 48 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 1e-56 | 48 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 1e-56 | 48 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 3e-48 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RORB6_22395 | YP_007876711.1 | pili chaperone protein | VFG1547 | Protein | 4e-57 | 48 |
| RORB6_22395 | YP_007876711.1 | pili chaperone protein | VFG0896 | Protein | 6e-57 | 48 |
| RORB6_22395 | YP_007876711.1 | pili chaperone protein | VFG0885 | Protein | 1e-48 | 47 |
