Gene Information

Name : RORB6_22300 (RORB6_22300)
Accession : YP_007876692.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4893314 - 4894459 bp
Length : 1146 bp
Strand : -
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGAAAAATTTACATACATTGAGCGTACACAGCGGCGTCTTTAACGATGGGCACGGCGCCGTTATGCCGCCGATTTACGC
CACCTCCACCTTTGCCCAACCCGCGCCGGGGCAGCATACCGGCTATGAGTATTCACGCAGCGGCAACCCGACCCGCCACG
CGCTGGAGACGGCGATTGCCGAGCTGGAGAGCGGCAGCCGCGGCTACGCGTTTGCTTCAGGGCTGGCGGCGATTTCCACC
GTCCTTGAGCTGCTGGATAAAGACAGCCATCTGGTGGCCGTCGATGATGTCTACGGCGGGACCTGGCGCCTGCTTGAGAA
CGTCCGCCGTCACAGCGCGGGGCTGCGGGTAAGCTGGGTCAAACCCGACGATCTGGTCGCTCTTGAAGCCGCTATCCAGC
CGGATACACGCATGATCTGGGTTGAAACCCCGACCAACCCGCTGCTGAAGCTGGCGGATCTCAGCGCTATCGCGGCGATT
GCCCGTCGGCACAATATTATCAGCGTCACCGATAACACCTTTGCTTCGCCGGTCATCCACCGCCCCCTCGAGCTGGGCTT
CGATATCGTGGTCCATTCGGCGACCAAATACCTGAACGGCCACTCCGACGTTGTCGCCGGGCTGGCGGTCGTCGGTGACA
ATCGCGAACTGGCGGAGAAGCTGGGCTATCTGCAAAATGCCCTGGGCGGCGTACTTGACCCGTTCAGCAGCTTCCTGACG
CTTCGCGGTATCCGGACTCTCGCGCTGCGTATGGAACGTCACAGCAGCAATGCGCTGGCCCTCGCCGAATGGCTTGAACA
GCAGCCGCAGGTGGAAAAAGTCTGGTTCCCGTGGCTGGCATCGCATCCCCACCATCAGCTGGCGCGCCGGCAGATGGCGC
TGCCGGGCGGGATGATTTCAGTGGTGGTGAAAGGCGATGATATCTATGCGCAGCAGGTCATCAGCAGGTTGAAGCTGTTT
ACTCTGGCAGAGAGTCTGGGGGGCGTGGAGAGTCTGGTCAGCCAACCGTTCAGCATGACCCATGCTTCAATTCCGCTGGA
ACAACGGCTGGCCAATGGCATCACGCCTCAGTTGATCCGTCTCTCCGTCGGGATTGAAGATCCGCAGGATCTGATCGCCG
ACTGGCAGCACGCATTGCGTGACTGA

Protein sequence :
MKNLHTLSVHSGVFNDGHGAVMPPIYATSTFAQPAPGQHTGYEYSRSGNPTRHALETAIAELESGSRGYAFASGLAAIST
VLELLDKDSHLVAVDDVYGGTWRLLENVRRHSAGLRVSWVKPDDLVALEAAIQPDTRMIWVETPTNPLLKLADLSAIAAI
ARRHNIISVTDNTFASPVIHRPLELGFDIVVHSATKYLNGHSDVVAGLAVVGDNRELAEKLGYLQNALGGVLDPFSSFLT
LRGIRTLALRMERHSSNALALAEWLEQQPQVEKVWFPWLASHPHHQLARRQMALPGGMISVVVKGDDIYAQQVISRLKLF
TLAESLGGVESLVSQPFSMTHASIPLEQRLANGITPQLIRLSVGIEDPQDLIADWQHALRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-75 49
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-74 49
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-54 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_22300 YP_007876692.1 cystathionine gamma-lyase BAC0207 Protein 1e-62 46