Gene Information

Name : RORB6_22115 (RORB6_22115)
Accession : YP_007876655.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4853201 - 4853860 bp
Length : 660 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCATTTTACTGGTGGAAGACGACAAGCTCATCGGCGATGGCATTAAAGTCGGGCTGACAAAAATGGGCTTCAGCAT
CGACTGGTTTACCCGCGGCGAAGAGGGCAAAACCGCGCTCTATACGGCGCCCTATGACGCGGCGATCCTCGACCTGACGC
TGCCCGGCATCGACGGGCTGGATATCCTGCGCGAATGGCGTAATCAGGGCCGCCACGAGCCGGTACTGATCCTCACGGCC
CGCGATGCGCTCAGCCAGCGGGTTGAAGGGCTGCGCCTCGGCGCCGATGACTATCTGTGTAAACCTTTCGCGCTGATTGA
AGTTGCCGCCCGTCTGGAGGCCCTGATTCGTCGCACCCACGGCCAGAGCAGCAGCGAGCTGCGCCATGGCCACGTTGCGC
TCGATCCCATTGGTCTGACCGTAACGGTGAACGGCGACAACCTGGCGCTGAAGCCAAAAGAGTTCGCCTTGCTGGAGCTG
CTGATGCGCAATGTCGGACGTGTGCTGCCGCGCAAGCTCATTGAAGAGAAACTCTATACCTGGGATGACGATGTCTCCAG
CAATGCGGTCGAGGTGCACGTTCATCACCTGCGCCGCAAGCTCGGCAGTGAATTTATTCGTACCGTTCACGGTATCGGCT
ATACCCTCGGTGATGCATGA

Protein sequence : 
MRILLVEDDKLIGDGIKVGLTKMGFSIDWFTRGEEGKTALYTAPYDAAILDLTLPGIDGLDILREWRNQGRHEPVLILTA
RDALSQRVEGLRLGADDYLCKPFALIEVAARLEALIRRTHGQSSSELRHGHVALDPIGLTVTVNGDNLALKPKEFALLEL
LMRNVGRVLPRKLIEEKLYTWDDDVSSNAVEVHVHHLRRKLGSEFIRTVHGIGYTLGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-39 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_22115 YP_007876655.1 DNA-binding transcriptional regulator QseB BAC0487 Protein 1e-40 45
RORB6_22115 YP_007876655.1 DNA-binding transcriptional regulator QseB BAC0638 Protein 3e-29 43
RORB6_22115 YP_007876655.1 DNA-binding transcriptional regulator QseB BAC0197 Protein 5e-33 43
RORB6_22115 YP_007876655.1 DNA-binding transcriptional regulator QseB BAC0111 Protein 3e-33 42
RORB6_22115 YP_007876655.1 DNA-binding transcriptional regulator QseB NC_002516.2.879194.p Protein 3e-28 41
RORB6_22115 YP_007876655.1 DNA-binding transcriptional regulator QseB BAC0083 Protein 8e-34 41
RORB6_22115 YP_007876655.1 DNA-binding transcriptional regulator QseB BAC0347 Protein 4e-33 41
RORB6_22115 YP_007876655.1 DNA-binding transcriptional regulator QseB BAC0308 Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_22115 YP_007876655.1 DNA-binding transcriptional regulator QseB VFG0473 Protein 8e-38 44
RORB6_22115 YP_007876655.1 DNA-binding transcriptional regulator QseB VFG1390 Protein 2e-32 42