|
Name : RORB6_21375 (RORB6_21375) Accession : YP_007876507.1 Strain : Raoultella ornithinolytica B6 Genome accession: NC_021066 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : - COG ID : - EC number : - Position : 4703246 - 4704232 bp Length : 987 bp Strand : - Note : COG0794 Predicted sugar phosphate isomerase involved in capsule formation DNA sequence : ATGTCGCAAATAGATTTGCCAACGGATTTTGACTTTCAACGGGTAGGACGTGAAGTTCTGGAAATTGAACGTGAAGGTCT GGCTCAACTCGATCAGTACATTAATGAAGATTTCACCCATGCCTGCGAGAAGATCTTCCGCTGCGCGGGCAAAGTCGTGG TGATGGGGATGGGCAAATCCGGCCATATCGGGCGTAAAATGGCGGCGACGTTTGCCAGCACCGGTACGCCGTCGTTTTTT GTGCACCCCGGCGAAGCGGCCCACGGCGATTTAGGCATGGTGACGCCGAAGGATGTGGTTATCGCGCTCTCGAATTCCGG CGAGTCGAACGAGATCCTGGCGCTGATTCCGGTACTTAAACGCCTGCAGGTGCCTCTTATCTGCATGACCAGCCGTCCGG AAAGCAGCATGGCGCGCGCCGCGGACATCCATCTTTGCGTGAAGGTACTGAAAGAAGCCTGTCCGTTAGGGCTGGCCCCG ACCTCCAGCACCACCGCCGCGCTGGTTATGGGCGATGCGCTGGCGGTTGCCCTGCTGGAAGCGCGCGGCTTTACCGCTGA AGATTTTGCGCTGTCGCACCCTGGCGGCGCACTGGGTCGTAAGCTGCTGTTGCGGGTCAATGATATTATGCATACGGGTG ATGAAATCCCGCACGTCAATGTGCAGGCCACCTTGCGCGATGCGCTGCTGGAAATCACACGTAAAAATTTAGGCATGACG GCTGTCTGTGATGATGACATGAACATCATCGGTATTTTCACCGATGGCGACCTGCGCCGGGTGTTTGATACCGGGGTCGA TATGCGTAATGCCAGTATTGCCGATGTCATGACACCGGGCGGCATTCGCATTCGCCCCGGTATTCTTGCCGTCGATGCGC TGAACCTGATGCAATCTCGCCATATCACCTGTGTGTTAGTTGCCGATGGCGACCGCCTGTTGGGTGTGGTACATATGCAC GATCTCCTGCGCGCAGGCGTAGTGTAA Protein sequence : MSQIDLPTDFDFQRVGREVLEIEREGLAQLDQYINEDFTHACEKIFRCAGKVVVMGMGKSGHIGRKMAATFASTGTPSFF VHPGEAAHGDLGMVTPKDVVIALSNSGESNEILALIPVLKRLQVPLICMTSRPESSMARAADIHLCVKVLKEACPLGLAP TSSTTAALVMGDALAVALLEARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVNVQATLRDALLEITRKNLGMT AVCDDDMNIIGIFTDGDLRRVFDTGVDMRNASIADVMTPGGIRIRPGILAVDALNLMQSRHITCVLVADGDRLLGVVHMH DLLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-49 | 42 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 8e-50 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-49 | 42 |
