Gene Information

Name : RORB6_18350 (RORB6_18350)
Accession : YP_007875902.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : PTS system ascorbate-specific transporter subunit IIC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4050543 - 4051910 bp
Length : 1368 bp
Strand : -
Note : COG3037 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGAATAGCTTTATCGAGTTTATTGTAAAAGATTTGCTCGGCCAGGCTTCGATATTAATCGCGTTTATTGCCATGCTGGG
TCTGATTTTACAGAAGAAGTCAGTGGGTAAAACGGTTGAGGGGACGTTTAAAACGCTGCTCGGGTTCTTAATTATGATGG
CCGGCATTAATATTATTGTCGCCACCCTGAGCTTCCTTAACGATATCTTCACCCACGGTTTCGGGATGAAAGGATACATC
ACCGATGTCGCTGCTATCGCCGGTCTGGCGAATCGAGAACTGGGTTCTGAAGTGGCGCTGACGCTGATGGTGATCTTTGC
CGTTAATATTATTATCGCCCGCCTGACACCGCTGAAATATATCTTCCTCACCGGACAGGCGCTGCTGTGGATGGCAACGA
TTGGCACGGTGATTGGCTACAAAGCCGGGCTGACCGGGCTGCCGCTGATCCTGACCGGCGGTATCTTTGGCGGCGTCATG
GCGGTACTGATGCCGGCGTTAGCGCAGCCGGTGGTCAGACGTATTACCGATTCTGACGATGTGGCTCTCGGGCATTTTTG
CACCATCGGATATTTAGTCCAGGCGGCGGTGGCCAAAGTGGTGGGTAAAGGTTCCCGCTCCACAGAAGATCTTGAACTGC
CTGATAACTTCAAGTTTCTGCAGGATACCTATCTCGCCATGGCGGTGGTGATGGTCCCCATGTACCTGATCCCGGCGCTG
GCTGCCGGACCCGAGTATATCGCCCAGTTTTCCGGCGGTGTGAACTACCTGATGTATGCCTTTATGCAGTCTGTTCAGTT
TGTGGCAGGGGTCTTTGTCCTCTACAGCGGCGTGCGCTTGTTACTGAATGAACTGGTCCCGGCTTTTCGCGGTATTGCCA
TGCGTATTGTGCCGGATGCGAAACCGGCGCTGGACTGTCCCGTCCTGTTCCCTTATGCCCCTAACGCGGTCATCGTGGGA
TTCCTCGCAACGACGGTGGGTTCGATCATTGGCATGTTGGTCTTCCCGATGTTTGGCCTGGCGATGATCCTCCCTGGACT
GTTAACCAACTTCTTTGCCGGCGGTACGGCGGGCGTCTTTGGTAATGCGCTGGGTGGGCGTCGCGGGGCAATGATTGGCG
GTGTGGTTCACGGTCTGTTTATTACTTTCCTGCCTGCCATTCTGGTACCGATGCTTGAAAGCTACGGTTTTACCGGCGTC
ACATTCAGTGATTCAGATGTTATTAGTTCAGGCCTGGTATTAGGCCATGCCTTACAGAACAACTGGTTATTTGTCGCCTT
GTTTATTGTTTTTGTTGCCGCACTGGCATGGTTCGTAAACGGTACATCATCTAAGCCTAAAGGGGAAAAGATTCATGAGT
CTGTATAA

Protein sequence :
MNSFIEFIVKDLLGQASILIAFIAMLGLILQKKSVGKTVEGTFKTLLGFLIMMAGINIIVATLSFLNDIFTHGFGMKGYI
TDVAAIAGLANRELGSEVALTLMVIFAVNIIIARLTPLKYIFLTGQALLWMATIGTVIGYKAGLTGLPLILTGGIFGGVM
AVLMPALAQPVVRRITDSDDVALGHFCTIGYLVQAAVAKVVGKGSRSTEDLELPDNFKFLQDTYLAMAVVMVPMYLIPAL
AAGPEYIAQFSGGVNYLMYAFMQSVQFVAGVFVLYSGVRLLLNELVPAFRGIAMRIVPDAKPALDCPVLFPYAPNAVIVG
FLATTVGSIIGMLVFPMFGLAMILPGLLTNFFAGGTAGVFGNALGGRRGAMIGGVVHGLFITFLPAILVPMLESYGFTGV
TFSDSDVISSGLVLGHALQNNWLFVALFIVFVAALAWFVNGTSSKPKGEKIHESV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 1e-80 45
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 1e-80 45
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 1e-80 45