Gene Information

Name : RORB6_17545 (RORB6_17545)
Accession : YP_007875742.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Unknown
Product : phosphomethylpyrimidine synthase ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3859499 - 3861394 bp
Length : 1896 bp
Strand : +
Note : COG0422 Thiamine biosynthesis protein ThiC

DNA sequence :
ATGTCTACAGAAAAACTGACCCGCCGACAGCAGCGCGAACGCGCTCAGCGTTTTATCGACACGCTTGAAGGCTCGGCCTT
CCCCAACTCGCAGCGTATCTACATTCAGGGTTCGCAGGATGATATTCGCGTCCCGATGCGTGAAATCCAGCTTAGCCCCA
CGCTTATCGGCGGCGGCAAAGAAAATCCGCGCTATGAAGATAACGAAGCGATCCCGGTGTACGATACCTCCGGTCCCTAC
GGCGACCCCAATATCCCGATCGATGTCCACCAGGGTCTGGCAAAGCTGCGCCAGCCGTGGATTGACGCGCGTAACGATAG
CGAACCGCTGAGCCATCGCAGCTCCGCTTACTCCCAGCAACGCCTGGCTGATGACGGCCTTGACGGGCTGCGCTTCAGCC
GCCTGCTGACGCCAAAGCGGGCCAGAGCCGGCCGCCGCGTGACTCAGCTCCACTACGCCCGCCGGGGCCTCGTCACGCCG
GAGATGGAGTTTATCGCCCTCCGCGAAAATATGGGCCGCGAGCGCATTCGTAGCGAAGTGCTGCGCCACCAGCACCCGGG
AGAAGGGTTCGGCGCCCATCTGCCGGACAACATCACGCCGGAGTTTGTCCGCGACGAAGTGGCTGCCGGGCGCGCCATTA
TTCCCGCCAATATTAACCATCCCGAGTCGGAGCCGATGATCATCGGCCGTAATTTTCTGGTCAAAGTTAACGCCAATATC
GGCAACTCCGCCGTCACCTCGTCCATTGAGGAGGAGGTCGAAAAGCTGGTGTGGTCAACCCGCTGGGGAGCGGATACGGT
GATGGATCTCTCCACCGGCCGCTATATCCACGAAACCCGCGAGTGGATCCTGCGCAACAGTCCGGTGCCTATCGGTACGG
TGCCGATCTATCAGGCGCTGGAAAAGGTCAACGGCATTGCCGAAGACCTGAGCTGGGAAGCCTTTCGCGACACCCTGCTG
GAACAGGCGGAGCAAGGCGTTGACTACTTCACCATCCACGCCGGCGTCCTGCTGCGCTACGTGCCGCTGACCGCCAGACG
CCTCACCGGTATTGTCTCCCGCGGCGGTTCGATCATGGCGAAATGGTGCCTGTCGCACCATCAGGAAAACTTCCTCTATC
AGCACTTCCGCGAAATTTGTGAAATCTGCGCCGCCTATGACGTTTCGCTTTCGCTCGGCGACGGTCTGCGCCCGGGTTCG
ATCCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCGAACCTTAGGCGAGCTGACGAAAATCGCCTGGGAGTACGA
CGTGCAGGTGATGATTGAAGGTCCGGGTCACGTGCCGATGCAGATGATCCGCCGCAACATGACCGAAGAGCTGGAGCACT
GTCACGAAGCGCCGTTCTATACCCTCGGGCCGTTAACCACCGATATCGCTCCCGGCTACGATCACTTCACCTCCGGTATC
GGCGCCGCGATGATCGGCTGGTTTGGCTGCGCGATGCTCTGCTACGTCACGCCGAAAGAGCACCTCGGGCTGCCGAATAA
AGAGGACGTGAAGCAGGGGCTGATTACCTACAAAATCGCCGCCCACGCCGCCGACCTCGCCAAAGGCCATCCCGGGGCGC
AGATCCGCGATAACGCCATGTCCAAAGCGCGTTTTGAGTTCCGCTGGGAGGATCAGTTCAACCTCGCCCTCGACCCGTTC
ACCGCCCGCGCCTGGCACGATGAAACCCTGCCGCAGGAGTCGGGAAAAGTCGCCCACTTCTGCTCCATGTGCGGACCCAA
ATTCTGTTCAATGAAAATCAGCCAGGAAGTGCGCGACTACGCCGCCCGCCAGGATATCGAAAGCGGAATGGCCGATATGT
CGCAGAACTTCCGCGCTCGCGGCGGCGAAATCTATTTACGTAAGGAGCAAGCCTGA

Protein sequence :
MSTEKLTRRQQRERAQRFIDTLEGSAFPNSQRIYIQGSQDDIRVPMREIQLSPTLIGGGKENPRYEDNEAIPVYDTSGPY
GDPNIPIDVHQGLAKLRQPWIDARNDSEPLSHRSSAYSQQRLADDGLDGLRFSRLLTPKRARAGRRVTQLHYARRGLVTP
EMEFIALRENMGRERIRSEVLRHQHPGEGFGAHLPDNITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGIAEDLSWEAFRDTLL
EQAEQGVDYFTIHAGVLLRYVPLTARRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGS
IQDANDEAQFAELRTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPF
TARAWHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAARQDIESGMADMSQNFRARGGEIYLRKEQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 71
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 71
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 71