Gene Information

Name : RORB6_17235 (RORB6_17235)
Accession : YP_007875680.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : ssDNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3786792 - 3787319 bp
Length : 528 bp
Strand : -
Note : COG0629 Single-stranded DNA-binding protein

DNA sequence : 
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTCGGCAAACTGGCGGAAGTGGCCGGCGAGTATCTGCGTAAAGGTTCTCAGGTCTATATT
GAAGGCCAGCTGCGTACCCGTAAATGGACTGACCAATCTGGTCAGGAAAAATACACCACCGAGATCGTGGTTAACGTTGG
CGGCACGATGCAAATGCTCGGCGGTCGTCAGCAGGGCGCAGGCGCTCCGGCAGGCGGCGGTCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCGCAGGGCGGCAACCAGTTTAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGGCACCGGCAGCA
CCTTCTAACGAACCCCCGATGGATTTCGATGACGATATCCCGTTCTAA

Protein sequence : 
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGQEKYTTEIVVNVGGTMQMLGGRQQGAGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQAPAA
PSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 3e-38 75
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 4e-44 64
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 4e-44 64
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 3e-44 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_17235 YP_007875680.1 ssDNA-binding protein VFG0576 Protein 8e-48 77