Gene Information

Name : RORB6_17160 (RORB6_17160)
Accession : YP_007875665.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3766960 - 3768501 bp
Length : 1542 bp
Strand : -
Note : COG4943 Predicted signal transduction protein containing sensor and EAL domains

DNA sequence :
GTGACGCTGGTGGTTCTGCTCCCCGTCGTGCTGGCGCTGTGGTTTGCGCAAATCAGAGCCAAAGCCGAAACCTCCGACCG
GCTTCATGCATTTTCACAACTGGCGCTACAGAAAACGGAAATGGTTGTTTATGAAGCCGATCGCGCGCGTGAAAAAGCCT
TGCAGTTTAAGGGGACAATATGCTCTTTCGCACATCAGCAATATATGTTGTCGGTTGTTCGCAGCCTGCTTTATGTCGAT
GATTTAATTTATGCCGACGGTACGCGTTTGTTTTGCTCGACTGCTGTCCGCCCCGATACCGCATGGCGTATTCCGCCGGC
GAATTATACAAAAAAGCCGGATATCGCTATCTACTACTATCGCGATACGCCTTTCTATCCCGGTTTTGCGATGAACTATA
TGCAGCGAGGGCACTACATTGCGGTTATTAATCCGCTCTCCTACAGTTCGTTAATATCGAGTGATAAAGATTTATCCTAC
GGTTTGTACGATACAAAAACGAATCAGTTTTTTTCCACCAGTAAAAATGCCGACCCCGCGGTACTGCATGGTCTGATTCG
TCAGGAAGATGCCTTTTTTCGGCACGGTAACCGGGTGTACACCGTGGCTCATTCCGCCATCCGCCCGATCGCCGTGATTA
TGTCTACCTCATACGCCAGTTATTACCAGAGCTTTTATGATCAGGTGACGCTCACCCTGCCGCTGGGGGGGATTTGCAGC
ATTTTGATCTTACTGGTGTGGTGGCGCACCCGGCAGCAATACCATTCGCCGCGAAATATGCTGCAACGCGCGCTCAATCG
GCGTCAGCTGTGCCTGCATTATCAGCCGATAATCGATATCGAAAACAACCGCTGCGTCGGAGCCGAAGCGCTGCTGCGCT
GGCCGGGATTTGACGGGCCGGTGATGACGCCGGCGGAGTTTATCCCTTTGGCGGAAAATGAAGGGATGATTGCGCAGGTT
ACCGATTACGTGGTGGATGAGTTATTTTCCGAACTCGGGGAGTTTTTGGCCGGGCATCCGCATCTGTATATTGCGATTAA
CCTGTCGGCCACCGATTTCCACTCTTCGCGGCTCATTGCCCAAATCGGTGAAAAGGCGCGGAGCTATGCGGTGAATATCG
ATCAAATTAAAATTGAAGTCACCGAGCGCGGATTTATTGACGTGCAGAAAACGATGCCGGTCATCCAGGCATTCCGCGAA
GCCGGGTATGAAATTGCCATTGATGACTTCGGCACCGGCTATTCCAATCTGTATAATCTCCACTCGCTTAACGTGGATAT
CCTGAAGATCGATAAATCGTTTATCGATACGCTCACTACCAATAGCACCAGCTACACGATCGCCGAGCATATTATTGAAA
TGGCCCGCAGCCTGCATTTAAAGACCGTTGCCGAAGGCGTCGAAACGGCGGACCAGGTTAACTGGCTGCGAAAACGCGGG
GTCCGGTATTGTCAGGGCTGGCACTTTGCGAAAGCGATGCCGCCACAGGAGTTCAGGCAGTGGCTGGCCAACGCTCCCGG
GCTGCTCAGCCCTTGCATGTGA

Protein sequence :
MTLVVLLPVVLALWFAQIRAKAETSDRLHAFSQLALQKTEMVVYEADRAREKALQFKGTICSFAHQQYMLSVVRSLLYVD
DLIYADGTRLFCSTAVRPDTAWRIPPANYTKKPDIAIYYYRDTPFYPGFAMNYMQRGHYIAVINPLSYSSLISSDKDLSY
GLYDTKTNQFFSTSKNADPAVLHGLIRQEDAFFRHGNRVYTVAHSAIRPIAVIMSTSYASYYQSFYDQVTLTLPLGGICS
ILILLVWWRTRQQYHSPRNMLQRALNRRQLCLHYQPIIDIENNRCVGAEALLRWPGFDGPVMTPAEFIPLAENEGMIAQV
TDYVVDELFSELGEFLAGHPHLYIAINLSATDFHSSRLIAQIGEKARSYAVNIDQIKIEVTERGFIDVQKTMPVIQAFRE
AGYEIAIDDFGTGYSNLYNLHSLNVDILKIDKSFIDTLTTNSTSYTIAEHIIEMARSLHLKTVAEGVETADQVNWLRKRG
VRYCQGWHFAKAMPPQEFRQWLANAPGLLSPCM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yjcC YP_219130.1 diguanylate cyclase/phosphodiesterase Not tested SPI-4 Protein 1e-164 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_17160 YP_007875665.1 hypothetical protein VFG0584 Protein 2e-165 64