Gene Information

Name : RORB6_15845 (RORB6_15845)
Accession : YP_007875402.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional activator CusR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3472330 - 3473013 bp
Length : 684 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAGATTTTGATCGTCGAAGATGAGAAAAAAACCGGGGAGTACCTGACCAAAGGGCTAACGGAGTCCGGTTTTGTCGT
CGACCTGGCCGATAATGGTCTGAACGGCTATCACCTGGCGATGACCGGCGATTATGACCTGTTGATTCTCGATATTATGC
TGCCCGATGTGAATGGCTGGGATATTGTCAGAATGCTGCGCGCCGCCAATAAAGGGGTGCCCGTCCTGCTGCTGACGGCT
CTGGGCACCGTTGAGCATCGGGTCAAGGGACTGGAGCTGGGCGCGGACGACTATCTGGTGAAGCCCTTTGCCTTTGCCGA
GCTGCTGGCGCGGGTCAGAACCTTGCTGCGCCGCGGTGCGTCGACCATGGTTGAAAGCCAGTTTCAGGCGGCGGATCTGT
TCGTCGATCTGGTGAGCCGTAAAGTGACCCGCGGCGGAACGCGTATCACCCTGACCAGCAAAGAGTTCACGCTGCTGGAG
TTCTTTCTGCGTCATCAGGGAGAAGTCCTGCCCCGGTCGCTGATTGCATCCCAGGTCTGGGACATGAACTTTGATAGCGA
TACCAATGCCATCGACGTGGCGGTCAAACGGCTGCGGGCCAAAATCGATAATGACTTTGAACCGAAGCTTATCCAGACCG
TGCGCGGCGTGGGCTATATGCTCGAGGTCCCGGATGTTGAGTAA

Protein sequence : 
MKILIVEDEKKTGEYLTKGLTESGFVVDLADNGLNGYHLAMTGDYDLLILDIMLPDVNGWDIVRMLRAANKGVPVLLLTA
LGTVEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGASTMVESQFQAADLFVDLVSRKVTRGGTRITLTSKEFTLLE
FFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRAKIDNDFEPKLIQTVRGVGYMLEVPDVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-55 53
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-54 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_15845 YP_007875402.1 DNA-binding transcriptional activator CusR BAC0111 Protein 4e-99 93
RORB6_15845 YP_007875402.1 DNA-binding transcriptional activator CusR BAC0347 Protein 2e-85 82
RORB6_15845 YP_007875402.1 DNA-binding transcriptional activator CusR BAC0083 Protein 1e-70 64
RORB6_15845 YP_007875402.1 DNA-binding transcriptional activator CusR BAC0638 Protein 3e-63 64
RORB6_15845 YP_007875402.1 DNA-binding transcriptional activator CusR BAC0308 Protein 1e-63 61
RORB6_15845 YP_007875402.1 DNA-binding transcriptional activator CusR BAC0197 Protein 5e-63 59
RORB6_15845 YP_007875402.1 DNA-binding transcriptional activator CusR BAC0125 Protein 8e-64 58
RORB6_15845 YP_007875402.1 DNA-binding transcriptional activator CusR AE000516.2.gene3505. Protein 3e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_15845 YP_007875402.1 DNA-binding transcriptional activator CusR VFG0596 Protein 2e-55 53
RORB6_15845 YP_007875402.1 DNA-binding transcriptional activator CusR VFG1390 Protein 4e-44 44
RORB6_15845 YP_007875402.1 DNA-binding transcriptional activator CusR VFG1389 Protein 9e-34 43