Gene Information

Name : RORB6_15775 (RORB6_15775)
Accession : YP_007875388.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : small multidrug resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3450941 - 3451360 bp
Length : 420 bp
Strand : +
Note : COG2076 Membrane transporters of cations and cationic drugs

DNA sequence : 
ATGTCTTCAAAAACAAAATGTTGGCTATGGATGCTGTTGGTTATCCTTTCGGAAACCTCGGCCACTTCCACCCTGAAAAT
GTTCGGTAGCAGCGAAGGGACCACCAAAATGCTGCTGCTCGGGCTGCTGGTGCTGCTGTACTGCACCTGCTACTACTCCC
TTTCCCGCGCGGTGAAAGATATTCCCGTTGGCCTGGCGTACGCCACCTGGTCCGGTACCGGGATTCTGGTGGTTTCGACG
CTGGGGATGGCATTTTACGGTCAGCATCCGGACACCGCGGCGATTATCGGCATGGCCGTTATCGCCAGCGGCATCGTTAT
CATGAATCTGTTTTCCAAAATGGGTAGCGAAGAGAGCGAAGATACGCCAGTTAAACCGGTTGCTTCACCCTCATCCCTGG
ACAAAAAAGTCGCCAACTAA

Protein sequence : 
MSSKTKCWLWMLLVILSETSATSTLKMFGSSEGTTKMLLLGLLVLLYCTCYYSLSRAVKDIPVGLAYATWSGTGILVVST
LGMAFYGQHPDTAAIIGMAVIASGIVIMNLFSKMGSEESEDTPVKPVASPSSLDKKVAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 2e-45 83
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 4e-15 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_15775 YP_007875388.1 small multidrug resistance protein BAC0002 Protein 1e-12 46
RORB6_15775 YP_007875388.1 small multidrug resistance protein NC_010410.6003348.p0 Protein 1e-12 46
RORB6_15775 YP_007875388.1 small multidrug resistance protein BAC0324 Protein 1e-13 42
RORB6_15775 YP_007875388.1 small multidrug resistance protein BAC0377 Protein 4e-11 42
RORB6_15775 YP_007875388.1 small multidrug resistance protein BAC0322 Protein 2e-14 41
RORB6_15775 YP_007875388.1 small multidrug resistance protein BAC0150 Protein 8e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_15775 YP_007875388.1 small multidrug resistance protein VFG1587 Protein 8e-46 83
RORB6_15775 YP_007875388.1 small multidrug resistance protein VFG1586 Protein 1e-15 45