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Name : RORB6_14380 (RORB6_14380) Accession : YP_007875109.1 Strain : Raoultella ornithinolytica B6 Genome accession: NC_021066 Putative virulence/resistance : Virulence Product : General secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 3153483 - 3155465 bp Length : 1983 bp Strand : + Note : COG1450 Type II secretory pathway, component PulD DNA sequence : TTGGCAAAGACAACGATTTTCCGCCTGATTTTCACCACTCTGATGATATTCAGCTCGCTGTTATTCAGGCCGCTGCACGC GGAAGAATTCTCCGCCAGCTTTAAGGGAACCGACATTCAGGAATTTATTAATACCGTGAGTAAAAACCTGAATAAAACGG TCATCATTGACCCCAGCGTACGCGGCACCATTACCGTCCGTAGTTACGATATGCTCAACGAAGAGCAATATTATCAGTTT TTCCTCAGCGTACTGGATGTCTATGGTTTTGCCGTTATCAATATGAATAACGGCGTGCTCAAAGTGGTACGTTCGAAAGA TGCCAAAACCGCCGCGGTCCCGGTCGCCAGCGATGCCGCCCCCGGCGAAGGGGATGAAGTCGTGACCCGCGTGGTTCCGC TGACCAACGTGGCCGCCCGCGATCTGGCGCCGCTGCTGCGCCAGCTCAACGATAACGCCGGGGCCGGCAGCGTGGTGCAC TACGAGCCGTCCAACGTGCTGCTGATGACCGGGCGCGCGGCGGTGATTAAGCGCCTGCTGACCATTGTCGAACGCGTCGA TAACGCGGGCGATCGCAGCGTAGTCACGGTTCCGCTCTCCTGGGCCTCCGCCGCCGACGTCGTCAAACTGGTCACCGAGT TAAACAAAGACACCAGTAAATCTGCGCTTCCCGGTTCGATGGTCGCGAACGTGGTCGCCGACGAGCGTACCAATTCGGTA CTGGTGAGCGGCGAGCCGAATTCACGGCAGCGAATTATCACCATGATTAAACAGCTCGACCGCCAACAGGCGGTACAGGG CAACACCAAAGTTATCTACCTCAAGTACGCCAAAGCCGCCGACCTGGTGGAGGTGTTAACCGGCATCAGCAGCACCCTGC AGAGCGACAAGCAGAACGCGAAACCGGTGGCCGCGCTGGATAAAAATATCATTATCAAGGCCCACGGCCAGACCAACGCC CTGATTGTCACCGCCGCGCCGGACGTGATGAACGATCTTGAGCGAGTGATCGCCCAGCTGGATATACGCCGTCCGCAGGT GCTGGTGGAAGCAATCATTGCCGAAGTTCAGGACGCCGACGGCCTCAACCTCGGCGTCCAGTGGGCCAACAAAAATGCCG GGATGACCCAGTTCAACAACAGCGGTCTGCCGATGTCGACGGTGATTGCCGGCGCCAATCAATACAACAAAGACGGCACG GTCACCACTTCGCTTGCCAGCGCGTTAAGCTCGTTTAACGGCATCGCCGCCGGGTTTTACCAGGGCAACTGGGCGATGCT GCTGACCGCGCTCTCCAGCAGCAGCAAAAACGATATTCTCGCCACCCCCAGCATTGTCACTCTCGACAACATGGAAGCCA CCTTTAACGTCGGCCAGGAAGTCCCGGTGCTCAGCGGTTCGCAAACCACCTCCGGGGATAACATCTTCAACACCGTTGAA CGTAAAACCGTCGGTATCAAGCTCAAGGTCAAACCGCAGATCAACGAAGGCGATTCGGTGCTGCTGGAGATCGAACAGGA GGTCTCCAGCGTCGCCGACTCCGCCTCCAGCACCAGCGCTGATTTAGGGGCCACCTTCAACACCCGCACGGTGAATAATG CGGTGCTGGTGGGCAGCGGCGAAACGGTGGTGGTCGGTGGACTGCTGGACAAAAGCGTCACCGATACCGCGGATAAAGTG CCTCTGCTCGGGGATATTCCGGTTATCGGCGCCCTTTTCCGCTCCAGCAGTAAGAAAGTCTCCAAACGGAACCTGATGCT GTTTATCCGCCCGACCATCATCCGCGATCGCGATAGCTACCGTCAGGCCTCTTCGGGCCAGTACAACGCTTTTAACGAAG CCCAGACTAAACAGCGCGGCAAAGAGAACAACGAGGCGTTGCTGAGTGACGATCGGCTGCATATCTACCCGCAGCAGGAC ACCGTGGCTTTTCGCCAGATAAGCGCCGCCATCGATGCCTTCAACCTCGGAGGCAAACTATGA Protein sequence : MAKTTIFRLIFTTLMIFSSLLFRPLHAEEFSASFKGTDIQEFINTVSKNLNKTVIIDPSVRGTITVRSYDMLNEEQYYQF FLSVLDVYGFAVINMNNGVLKVVRSKDAKTAAVPVASDAAPGEGDEVVTRVVPLTNVAARDLAPLLRQLNDNAGAGSVVH YEPSNVLLMTGRAAVIKRLLTIVERVDNAGDRSVVTVPLSWASAADVVKLVTELNKDTSKSALPGSMVANVVADERTNSV LVSGEPNSRQRIITMIKQLDRQQAVQGNTKVIYLKYAKAADLVEVLTGISSTLQSDKQNAKPVAALDKNIIIKAHGQTNA LIVTAAPDVMNDLERVIAQLDIRRPQVLVEAIIAEVQDADGLNLGVQWANKNAGMTQFNNSGLPMSTVIAGANQYNKDGT VTTSLASALSSFNGIAAGFYQGNWAMLLTALSSSSKNDILATPSIVTLDNMEATFNVGQEVPVLSGSQTTSGDNIFNTVE RKTVGIKLKVKPQINEGDSVLLEIEQEVSSVADSASSTSADLGATFNTRTVNNAVLVGSGETVVVGGLLDKSVTDTADKV PLLGDIPVIGALFRSSSKKVSKRNLMLFIRPTIIRDRDSYRQASSGQYNAFNEAQTKQRGKENNEALLSDDRLHIYPQQD TVAFRQISAAIDAFNLGGKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 2e-131 | 47 |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-124 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RORB6_14380 | YP_007875109.1 | General secretion pathway protein D | VFG2047 | Protein | 2e-121 | 46 |
