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Name : gabD (RORB6_13935) Accession : YP_007875020.1 Strain : Raoultella ornithinolytica B6 Genome accession: NC_021066 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 3049656 - 3051104 bp Length : 1449 bp Strand : + Note : COG1012 NAD-dependent aldehyde dehydrogenases DNA sequence : ATGCAACTGAATGACCTAACCTTGTTCCGCCAGCAGGCATTTATCAATGGTGAGTGGCGTGATGCCCTCAGCAGCGATGT CATTACGGTGACCAACCCGGCGAACGGAGAGGTGCTGGGCTCAGTCCCTAAAATGGGCGCAGAAGAGACGCGCGATGCGA TCCAGGCCGCCCATCGCGCCCTTCCCGCCTGGCGACAGCTAACGGCAAAAGAGCGCGCCGCGATCCTGCGCCGCTGGTTC GATCTGATGATGGCAAACCAGGACGATCTGGCCCGGCTGATGACCCTGGAGCAGGGCAAACCGCTGGCAGAAGCAAAAGG CGAGATTGGCTACGCCGCTTCATTTATCGAATGGTTTGCCGAAGAGGGAAAACGCATTTATGGCGATACCATTCCCGGTC ATCAGGCCGATAAGCGCCTGATCGTGATTAAACAGCCGATTGGCGTTACCGCCGCGATCACGCCGTGGAATTTTCCAGCG GCGATGATCACCCGTAAAGCCGGCCCGGCGTTAGCCGCCGGCTGCACAATGGTACTCAAACCCGCCAGCCAGACCCCTTT TTCCGCGCTGGCGCTGGCCGAACTGGCCAGACGCGCCGGGATCCCTGACGGCGTATTTAACGTGGTGACCGGCTCCGCCA GCGCGGTAGGTAATGAACTGACCGGCAACCCGCTGGTGCGTAAGCTGTCGTTTACCGGCTCCACGGAAATCGGCCGCCAG CTGATGGCGCAGTGTGCCCAGGACATCAAAAAAGTTTCGCTCGAACTGGGCGGTAACGCGCCGTTTATCGTGTTTGACGA TGCCGATCTGGATAAAGCGGTAGAAGGCGCCATGGCGTCGAAGTTTCGTAACGCCGGGCAGACCTGCGTCTGCGCCAATC GCCTGTACGTGCAGGACGGGGTGTATGCGCGTTTTGCCGAAAAACTGCAGCAGGCGGTGGAGCAGCTGCATCTCGGCGAC GGCCTTCAGGCGGGGGTCACAACCGGACCATTGATTGATGAGAAAGCCATTGCCAAAGTGCAGGAACATATTGCCGATGC CGTCGGGAAAGGCGCCCGGGTCATCACCGGCGGGAAAGTGGATGCCCTCGGCGGCAACTTCTTTCAGCCGACTATTCTGG TCGATGTTCCCGACGGTGCAAAAGTGGCGAAAGAAGAGACGTTCGGCCCGTTGGCTCCTCTGTTCCGCTTCACAGATGAA GCGGATGTCATCCGCCAGGCCAACGATACTGAATTTGGCCTCGCCGCCTACTTCTATGCCCGTGATTTGAGCCGCGTTTT CCGCGTCGGCGAAGCGCTGGAGTATGGGATTGTGGGCATCAATACCGGGCTGATTTCCAACGAAGTCGCCCCGTTTGGTG GCGTGAAGGCTTCCGGTCTGGGCCGCGAAGGCTCGAAGTATGGCATTGAAGACTATTTAGAAATCAAATACATGTGTATT GGCCTTTAA Protein sequence : MQLNDLTLFRQQAFINGEWRDALSSDVITVTNPANGEVLGSVPKMGAEETRDAIQAAHRALPAWRQLTAKERAAILRRWF DLMMANQDDLARLMTLEQGKPLAEAKGEIGYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELARRAGIPDGVFNVVTGSASAVGNELTGNPLVRKLSFTGSTEIGRQ LMAQCAQDIKKVSLELGGNAPFIVFDDADLDKAVEGAMASKFRNAGQTCVCANRLYVQDGVYARFAEKLQQAVEQLHLGD GLQAGVTTGPLIDEKAIAKVQEHIADAVGKGARVITGGKVDALGGNFFQPTILVDVPDGAKVAKEETFGPLAPLFRFTDE ADVIRQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGLISNEVAPFGGVKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-158 | 67 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-88 | 42 |
