Gene Information

Name : RORB6_12835 (RORB6_12835)
Accession : YP_007874800.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2815916 - 2816602 bp
Length : 687 bp
Strand : -
Note : COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component

DNA sequence : 
ATGCCAGCGGAAAACATACTTGAAGTTCATCATCTTAAGAAGTCCGTCGGTCAGGGAGAGCATCAGCTTTCCATCCTTAC
CGGAGTTGAGCTGGTTGTCAAACCGGCGCAGACCATCGCCCTGATTGGCGAGTCGGGTTCGGGGAAATCGACCCTGCTGG
CGATTCTTGCCGGGCTGGATGACGGCAGCAGCGGCGAGGTCTCCTTACTCGGCCAGCCGCTGCATTCGATGGATGAAGAG
GCGAGGGCGCGGCTGCGTGCTAAACATGTCGGCTTTGTCTTTCAGTCATTTATGCTGATTCCAACCCTTAATGCTCTGGA
AAACGTCGAGCTTCCGGCGCTGCTTCGCGGTGAGACCGATAACCAAAGCCGTGGCAGCGCCCGGGCTTTGCTGGAGCAGC
TGGGGCTGGGGAAACGTCTCCATCATCTGCCGGCGCAGCTTTCCGGCGGCGAACAGCAGCGGGTGGCGCTCGCCCGCGCA
TTTAACGGCCGGCCTGAGCTGCTGTTTGCCGATGAGCCTACCGGCAATCTTGACCGCCATACCGGCGACAAAATTGCCGA
TCTGCTGTTCTCCCTTAATCGAGAGCATGGTACCACGCTGATTCTGGTGACCCACGATCCGCTGCTGGCGGCGCGCTGCG
ATCGGCGGCTGCGTCTGGTGGACGGCCAGCTGCGGGAGGAAGCATGA

Protein sequence : 
MPAENILEVHHLKKSVGQGEHQLSILTGVELVVKPAQTIALIGESGSGKSTLLAILAGLDDGSSGEVSLLGQPLHSMDEE
ARARLRAKHVGFVFQSFMLIPTLNALENVELPALLRGETDNQSRGSARALLEQLGLGKRLHHLPAQLSGGEQQRVALARA
FNGRPELLFADEPTGNLDRHTGDKIADLLFSLNREHGTTLILVTHDPLLAARCDRRLRLVDGQLREEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-31 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_12835 YP_007874800.1 ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 1e-31 46
RORB6_12835 YP_007874800.1 ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 3e-38 46
RORB6_12835 YP_007874800.1 ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 7e-35 42