Gene Information

Name : RORB6_12760 (RORB6_12760)
Accession : YP_007874785.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2798087 - 2798788 bp
Length : 702 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAGACTACTGCTGGTCGAAGATCAAACCATGGCGGCGGACTATATTGCGAAGGGGCTGCGGGAGAACGACTTTGTGGT
CGATGTCGCGCACGATGGCGTAGACGGTTTACACTTTCTGCTGACTAACGATTACGATCTGGCGATCCTCGATGTGATGC
TGCCCGGCATGAATGGCTGGAAGATCCTGGAGCTGGCCCGCCAGGCGGGAAAGATGACGCCAGTGATGTTTCTCACCGCC
CGTGATGACGTTGAAGACCGGGTATGTGGCCTGGAGCTGGGGGCTGAAGACTACCTGATTAAGCCTTTCTCTTTCAGCGA
GCTGTTGGCGAGAGTACGGGTGATTATGCGCCGTGGCGCGCCTCATGCTGCCAGCAGCGAGGAGGCTGTGCTGCAGATAA
GCGATCTGCAACTCGATTTTCTCAAGCACCGCGCATCGCGTAATGGCAAACGTATTGAGTTGACACAAAAGGAGTTTTTG
TTGCTGAGTCTGCTGATGCGCCGCCGTGGCGAAGTGCTGTCGCGTACCGTGTTGGCCGAACAGGTCTGGGATATGAATTT
TGACCCGGAGACCAACGTGATTGATGTTGCCGTCCGCCGCCTGCGTAGCAAAATTGACGACGGGTATGAGGTGAAACTGC
TGCATACCATCCGCGGCGCGGGATACGTGCTGGAAGAGAGGAACGATGCTGATTCCGCGTAA

Protein sequence : 
MRLLLVEDQTMAADYIAKGLRENDFVVDVAHDGVDGLHFLLTNDYDLAILDVMLPGMNGWKILELARQAGKMTPVMFLTA
RDDVEDRVCGLELGAEDYLIKPFSFSELLARVRVIMRRGAPHAASSEEAVLQISDLQLDFLKHRASRNGKRIELTQKEFL
LLSLLMRRRGEVLSRTVLAEQVWDMNFDPETNVIDVAVRRLRSKIDDGYEVKLLHTIRGAGYVLEERNDADSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-55 52
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-54 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_12760 YP_007874785.1 two-component response regulator BAC0083 Protein 6e-67 60
RORB6_12760 YP_007874785.1 two-component response regulator BAC0197 Protein 1e-64 59
RORB6_12760 YP_007874785.1 two-component response regulator BAC0125 Protein 3e-63 59
RORB6_12760 YP_007874785.1 two-component response regulator BAC0638 Protein 1e-59 57
RORB6_12760 YP_007874785.1 two-component response regulator BAC0111 Protein 3e-63 54
RORB6_12760 YP_007874785.1 two-component response regulator BAC0308 Protein 9e-59 54
RORB6_12760 YP_007874785.1 two-component response regulator BAC0347 Protein 3e-56 52
RORB6_12760 YP_007874785.1 two-component response regulator HE999704.1.gene1528. Protein 4e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_12760 YP_007874785.1 two-component response regulator VFG0596 Protein 3e-55 52
RORB6_12760 YP_007874785.1 two-component response regulator VFG1389 Protein 1e-35 42
RORB6_12760 YP_007874785.1 two-component response regulator VFG1390 Protein 7e-39 41