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Name : RORB6_12675 (RORB6_12675) Accession : YP_007874768.1 Strain : Raoultella ornithinolytica B6 Genome accession: NC_021066 Putative virulence/resistance : Unknown Product : DNA-binding transcriptional activator CadC Function : - COG functional category : - COG ID : - EC number : - Position : 2781434 - 2782966 bp Length : 1533 bp Strand : - Note : COG3710 DNA-binding winged-HTH domains DNA sequence : ATGCAACAACCTGTTGTTCGCGTGGGAGAATGGCTGGTTACACCCTCTGTTAACCAAATCAGCCGGAAGGGGCGCCAGCT TACTCTGGAACCGCGCTTAATCGATCTTTTGGTCTTCTTTGCCCGTCACCCTGGTGAAGTGCTCAGCAGGGACGAGCTTA TTGATAATGTCTGGACACGTAACGTGGTCACCAGCCACGTCGTCACGCAGAGTATTTCCGAGCTACGTAAGTCGTTGAAA GATGGCAATGATAGTAGCCTCGAATATATTGCGACGGTACCCAAGCGCGGCTATAAGCTCACGGTGCCGGTCATCTGGTG CACGGAAGAGGGGGAAGAGCCCGCGATGGCGATCTCCCCTGCGGTCCCCGCTGCGACGCCTGACCTGACGACCCCGACGC GCGCTGCCGGCGAGATTGAGCAAGGCCAGACGCCGTCCGCAAAACCGGAGAAGCGCCGACGTATTACTACCTTCTGGGTA TGGATCCTGTTCCTGCTGGCGCTGGGTTCCTGCGTGGCCCTGGTGGCGCTGTCGTCGATCGAGTCGCGGCCACCGGTGAA TAAAGCGCGCCTGCTGCTGAACCCGCGCGATATCGATATCCATCTGCTGAAAGGTAACTCCTGCACCAACTGGGCATCGC AGCATTCGTATGCGGTGGGCCTGGGCAGTCTGGTGACCACGTCGCTCAACACCTTCTCGACCTTTATGGTGCATGACAAA ACCAACTACAACATTAATGAGCCAAGCAGTTCAGGTAAAACGCTGACGATTGAGTTCGTCAACCAGCGGCACTATCGCGC GCAGCAGTGCTTTATGTCCGTGCAGATGGTGGATAACGCCGACGGTTCAACGATGATGGACAAACGTTATTTCATTACCA GCGACAACCAGCTGGCGATTCAAAACGATCTGCTGAGCAGCTTATCGGAGGCCTTAAAGCAGCCGTGGTCGGAACGCATG CAGGCGATGCTGAAACAGTATCAACCGTCGCACAGCACGGCGCTGACCCATTTCTACGAGTCGCATCAGTTATTAATGAA CGGTGATGTCGATTCCTTAGGTAAGGCCAGCGCGCTGCTTGATGATGTGATTAAAGACTCGCCTGAGTTTGCTTACGCCT ATGCGGAAAAAACGCTGGTGGATGTTTTGCGTCATTCGCAGCAGCCGTTAAATAAAGAGCAGCTCAACGCGCTGTACGCT GAAATCACCCGGGTTGGCGATATGCCGGGGATCAAAGATACGGCGGTATTTTACCAAATTAAAACAGTGGATTTGCTGGG CCAGGGTAAAGTCGATGAAGCGTATAACGCGATTAATACCGGGATCGACCTTGAGATGTCGTGGATGAATTACGTGCTGC TGGGTAAAGTCTACGAGATGAAAGGGGAGAACCGGGAAGCTGCGGATGCTTATCTGACGGCCTTTAATTTACGCCCGGGC GAGAACACCTTTTACTGGATTGAAAATGCAGTATTCCAGACCTCGGTTACCCGCGTGGTCCCGTACCTCGATAATTTCCT CTCTTCAGAATAA Protein sequence : MQQPVVRVGEWLVTPSVNQISRKGRQLTLEPRLIDLLVFFARHPGEVLSRDELIDNVWTRNVVTSHVVTQSISELRKSLK DGNDSSLEYIATVPKRGYKLTVPVIWCTEEGEEPAMAISPAVPAATPDLTTPTRAAGEIEQGQTPSAKPEKRRRITTFWV WILFLLALGSCVALVALSSIESRPPVNKARLLLNPRDIDIHLLKGNSCTNWASQHSYAVGLGSLVTTSLNTFSTFMVHDK TNYNINEPSSSGKTLTIEFVNQRHYRAQQCFMSVQMVDNADGSTMMDKRYFITSDNQLAIQNDLLSSLSEALKQPWSERM QAMLKQYQPSHSTALTHFYESHQLLMNGDVDSLGKASALLDDVIKDSPEFAYAYAEKTLVDVLRHSQQPLNKEQLNALYA EITRVGDMPGIKDTAVFYQIKTVDLLGQGKVDEAYNAINTGIDLEMSWMNYVLLGKVYEMKGENREAADAYLTAFNLRPG ENTFYWIENAVFQTSVTRVVPYLDNFLSSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadC | NP_756990.1 | DNA-binding transcriptional activator CadC | Not tested | PAI II CFT073 | Protein | 1e-168 | 68 |
| cadC | AAL67383.1 | transcriptional activator | Not tested | PAI II CFT073 | Protein | 8e-169 | 68 |
