Gene Information

Name : RORB6_12035 (RORB6_12035)
Accession : YP_007874642.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : iron-enterobactin transporter membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2629201 - 2630208 bp
Length : 1008 bp
Strand : +
Note : COG0609 ABC-type Fe3+-siderophore transport system, permease component

DNA sequence :
ATGTCGTTTTCTACGACCACGGTGCGCGCCGTTGCCGTACCGGGTCTGTTACTCGTTTTAGCCTTTGCTATCGCTCTCAG
CCTGCTGATTGGCGCCAAACCTCTTCCAGTGAGCGTCGTCGTGGATGCTTTTTCCGCTACCTGTCAGAGTGCCGACTGCA
CGATCGTGCTGGACGCCCGGCTGCCGCGAACCCTGGCGGGACTGCTGGCCGGCGCCGCGCTGGGCCTGGCAGGATCGCTG
ATGCAGACTCTGACGCGTAATCCCCTTGCCGACCCCGGCATTCTCGGCGTGAACTCCGGCGCCAGCTTCGCAATTGTGCT
GGGTGCCGCGCTGTTTGGCATCCACTCCCCGCAGGAACAGCTGCTGATGTCGTTTTGCGGCGCGTTTGGCGCCTCGCTGC
TGGTGGCCTTTACCGGCAGTCAGGGCGGCGGTCAGCTCAGCCCGGTACGTCTGACGCTAGCCGGCGTGGCGCTGGCGGCC
GTGCTGGAAGGGCTCTCCAACGGGATTGCGCTCCTCAATCCTGATGTCTATGACCAACTACGTTTCTGGCAGGCCGGCTC
GCTGGATATTCGCACTCTGCAGACGCTGAAAATCGTCCTCCTGCCGGTGGTGATTGCCGCCGTCGTGACGCTGCTGTTAA
GCCGGGCGTTGAACAGTCTGAGTCTCGGCAACGATACCGCCACCGCGCTCGGCAGCCGGGTGGCCCGCACTCAGGTCATC
GGCCTGCTAGCGATTACCGTGCTTTGCGGTAGCGCCACGGCGGTAGTTGGCCCCATCGCTTTTATCGGCCTGATGATGCC
GCATATGTCGCGCTGGCTGGTGGGCGCTGACCATCGCTGGTCGTTGCCGGTCACCTTACTGGCAACCCCTGCCCTGCTGC
TGTTTGCCGATGTATTGGGCCGCCTGTTGGTCCCCGGTGAACTGCGAGTCTCGGTAGTCAGCGCCTTTATCGGCGCGCCG
GTACTGATTTGGCTGGTGCGCCGTCAGCCGCGCGGAGGTGCAATATGA

Protein sequence :
MSFSTTTVRAVAVPGLLLVLAFAIALSLLIGAKPLPVSVVVDAFSATCQSADCTIVLDARLPRTLAGLLAGAALGLAGSL
MQTLTRNPLADPGILGVNSGASFAIVLGAALFGIHSPQEQLLMSFCGAFGASLLVAFTGSQGGGQLSPVRLTLAGVALAA
VLEGLSNGIALLNPDVYDQLRFWQAGSLDIRTLQTLKIVLLPVVIAAVVTLLLSRALNSLSLGNDTATALGSRVARTQVI
GLLAITVLCGSATAVVGPIAFIGLMMPHMSRWLVGADHRWSLPVTLLATPALLLFADVLGRLLVPGELRVSVVSAFIGAP
VLIWLVRRQPRGGAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 8e-31 47
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 8e-31 47
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 8e-31 47
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 8e-31 47
fecC AAL08453.1 FecC Virulence SRL Protein 5e-15 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_12035 YP_007874642.1 iron-enterobactin transporter membrane protein VFG0926 Protein 1e-89 88
RORB6_12035 YP_007874642.1 iron-enterobactin transporter membrane protein VFG1044 Protein 3e-15 42