Gene Information

Name : RORB6_11845 (RORB6_11845)
Accession : YP_007874604.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : Co-activator of prophage gene expression IbrB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2584421 - 2585032 bp
Length : 612 bp
Strand : +
Note : COG1475 Predicted transcriptional regulators

DNA sequence :
ATGCAGGATCTTGAGCGCTATCTGAACACTCTCCAGGATGCAGAACGCGTGGAGGCGCTGAACGCTTTTCGCCAGCTTTT
GCACAATTACAGTCCGTTCAAATCACATCCCGTTGACTGTGTGCTGTGGGTCAAGCAGGAGAGCGTTTCGCCAAATGACT
ACAACCCCAACAACCTCGCCCCGCCGGAAAAACGTCTGCTGCTCACTTCGCTGGAGACGGATGGTTTTACGCAACCCATT
GTGGTGCTCAGACAAGATGAGGCGCGCTACACCATCGTTGACGGATTCCATCGCCACGAGCTCGCCAGAAACAAAGCGCC
GTTAAAAAAGCAGTTGAACGGCTATCTCCCGGTTACCTGCCTGGAAAACCCTTCTCCCGGTCGCGATACGCTGATGGCCG
CCACCATTCGCCATAACCGCGCGCGGGGCCGCCATCAGATCCCCGCCATGTCCGCGATCGTCCATGAGCTGGCAAACCTG
GGCTGGTCAGACGCGAAAATCAGTCAGGAGCTGGGTATGGACGCTGACGAGGTGTTACGCCTGAAACAAATTAACGGTCT
TGCCGAACTGTTTGGCGACCGGCAATTTTCTCAGGCGTGGACCGTAAAATAG

Protein sequence :
MQDLERYLNTLQDAERVEALNAFRQLLHNYSPFKSHPVDCVLWVKQESVSPNDYNPNNLAPPEKRLLLTSLETDGFTQPI
VVLRQDEARYTIVDGFHRHELARNKAPLKKQLNGYLPVTCLENPSPGRDTLMAATIRHNRARGRHQIPAMSAIVHELANL
GWSDAKISQELGMDADEVLRLKQINGLAELFGDRQFSQAWTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 2e-54 58
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 2e-54 58
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 6e-54 58
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 7e-54 57
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 6e-54 57
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 5e-54 57
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 5e-54 57
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-41 55
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 7e-41 55
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-41 55
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 2e-30 51
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 9e-29 48
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 1e-28 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_11845 YP_007874604.1 Co-activator of prophage gene expression IbrB VFG1505 Protein 2e-54 58